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Merge pull request #134 from mcguirepr89/forms

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Forms
This commit is contained in:
Patrick McGuire
2022-02-08 20:58:55 -05:00
committed by GitHub
parent 927cc077cd 4c218ef8a7
commit 45e71a8a04
68 changed files with 9135 additions and 1702 deletions
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Birders_Guide_Installer.sh
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@@ -1,300 +0,0 @@
#!/usr/bin/env bash
set -e
USER=pi
HOME=/home/pi
my_dir=${HOME}/BirdNET-Pi
branch=main
trap '${my_dir}/scripts/dump_logs.sh && exit' EXIT SIGHUP SIGINT
if [ "$(uname -m)" != "aarch64" ];then
echo "BirdNET-Pi requires a 64-bit OS.
It looks like your operating system is using $(uname -m),
but would need to be aarch64.
Please take a look at https://birdnetwiki.pmcgui.xyz for more
information"
exit 1
fi
stage_1() {
echo
echo "Beginning Stage 1"
echo
echo "Ensuring the system is up-to-date."
sudo apt -qq update
sudo apt -qqy full-upgrade
sudo apt -y autoremove --purge
echo "System Updated!"
if ! which git &> /dev/null; then
echo "Installing git"
sudo apt install -qqy git
fi
touch ${HOME}/stage_1_complete
echo "Stage 1 complete"
}
stage_2() {
echo
echo "Beginning stage 2"
echo
echo "Checking for an internet connection to continue . . ."
until ping -c 1 8.8.8.8 &> /dev/null; do
sleep 1
done
echo "Connected!"
echo
if [ ! -d ${my_dir} ];then
cd ${HOME} || exit 1
echo "Cloning the BirdNET-Pi repository $branch branch into your home directory"
git clone -b ${branch} https://github.com/mcguirepr89/BirdNET-Pi.git ${HOME}/BirdNET-Pi
else
cd ${my_dir} && git checkout ${branch}
fi
source ${my_dir}/Birders_Guide_Installer_Configuration.txt
if [ -z ${LATITUDE} ] || [ -z ${LONGITUDE} ] || [ -z ${CADDY_PWD} ] || [ -z ${ICE_PWD} ] || [ -z ${DB_PWD} ];then
echo
echo "Follow the instructions to fill out the LATITUDE and LONGITUDE variables
and set the passwords for the live audio stream. Save the file after editing
and then close the Mouse Pad editing window to continue."
echo
if [ -z "$SSH_CONNECTION" ];then
EDITOR=mousepad
else
EDITOR=nano
fi
$EDITOR ${my_dir}/Birders_Guide_Installer_Configuration.txt
while pgrep $EDITOR &> /dev/null;do
sleep 1
done
source ${my_dir}/Birders_Guide_Installer_Configuration.txt || exit 1
fi
echo "Installing the BirdNET-Pi configuration file."
install_birdnet_config || exit 1
echo "Installing BirdNET-Lite"
if ${my_dir}/scripts/install_birdnet.sh;then
echo "The next time you power on the raspberry pi, all of the services will start up automatically.
The installation has finished. Press Enter to close this window."
read
else
echo "Something went wrong during installation. Open a github issue or email mcguirepr89@gmail.com"
fi
}
install_birdnet_config() {
cat << EOF > ${my_dir}/birdnet.conf
################################################################################
# Configuration settings for BirdNET-Pi #
################################################################################
############ CHANGE THE LATITUDE AND LONGITUDE TO STATIC VALUES ################
## LATITUDE and LONGITUDE are self-explanatroy. Find them easily at
## maps.google.com.
## Example: these coordinates would indicate the Eiffel Tower in Paris, France.
## LATITUDE=48.858
## LONGITUDE=2.294
## These are input as shell substitutions so that this will work out of the box.
## It guesses your latitude and longitude based off of your network information.
## THESE SHOULD BE CHANGED TO STATIC NUMBERS!!!!
LATITUDE=${LATITUDE}
LONGITUDE=${LONGITUDE}
## RECS_DIR is the location birdnet_analysis.service will look for the data-set
## it needs to analyze. Be sure this directory is readable and writable for
## the BIRDNET_USER. If you are going to be accessing a remote data-set, you
## still need to set this, as this will be where the remote directory gets
## mounted locally.
RECS_DIR=/home/pi/BirdSongs
#----------------------- Web Interface User Password ------------------------#
#____________________The variable below sets the 'birdnet'_____________________#
#___________________user password for the live audio stream,___________________#
#_________________web tools, system info, and processed files__________________#
## CADDY_PWD is the plaintext password (that will be hashed) and used to access
## certain parts of the web interface
CADDY_PWD=changeme
#------------------------- MariaDB User Passwords ---------------------------#
#_____________The variable below sets the password for the_____________________#
#_______________________'birder' user on the MariaDB___________________________#
## DB_PWD is for the 'birder' user
DB_PWD=changeme
#------------------------- Live Audio Stream --------------------------------#
#_____________The variable below configures/enables the live___________________#
#_____________________________audio stream.____________________________________#
## ICE_PWD is the password that icecast2 will use to authenticate ffmpeg as a
## trusted source for the stream. You will never need to enter this manually
## anywhere other than here.
ICE_PWD=changeme
#--------------------- BirdWeather Station Information -----------------------#
#_____________The variable below can be set to have your BirdNET-Pi____________#
#__________________also act as a BirdWeather listening station_________________#
BIRDWEATHER_ID=${BIRDWEATHER_ID}
#----------------------- Web-hosting/Caddy File-server -----------------------#
#________The four variables below can be set to enable internet access_________#
#____________to your data,(e.g., extractions, raw data, live___________________#
#______________audio stream, BirdNET.selection.txt files)______________________#
## BIRDNETPI_URL is the URL where the extractions, data-set, and live-stream
## will be web-hosted. If you do not own a domain, or would just prefer to keep
## the BirdNET-Pi on your local network, keep this EMPTY.
BIRDNETPI_URL=${BIRDNETPI_URL}
EXTRACTIONLOG_URL=${EXTRACTIONLOG_URL}
BIRDNETLOG_URL=${BIRDNETLOG_URL}
#------------------- Mobile Notifications via Pushed.co ---------------------#
#____________The two variables below enable mobile notifications_______________#
#_____________See https://pushed.co/quick-start-guide to get___________________#
#_________________________these values for your app.___________________________#
# Keep these EMPTY if haven't setup a Pushed.co App yet. #
## Pushed.co App Key and App Secret
PUSHED_APP_KEY=${PUSHED_APP_KEY}
PUSHED_APP_SECRET=${PUSHED_APP_SECRET}
################################################################################
#-------------------------------- Defaults ----------------------------------#
################################################################################
#------------------------------- NoMachine ----------------------------------#
#_____________The variable below can be set include NoMachine__________________#
#_________________remote desktop software to be installed._____________________#
# Keep this EMPTY if you do not want to install NoMachine. #
## INSTALL_NOMACHINE is simply a setting that can be enabled to install
## NoMachine alongside the BirdNET-Pi for remote desktop access. This in-
## staller assumes personal use. Please reference the LICENSE file included
## in this repository for more information.
## Set this to Y or y to install NoMachine alongside the BirdNET-Lite
INSTALL_NOMACHINE=y
#
#------------------------------ Extraction Service ---------------------------#
## DO_EXTRACTIONS is simply a setting for enabling the extraction.service.
## Set this to Y or y to enable extractions.
DO_EXTRACTIONS=y
#----------------------------- Recording Service ----------------------------#
#____________________The variable below can be set to enable __________________#
#________________________the birdnet_recording.service ________________________#
## DO_RECORDING is simply a setting for enabling the 24/7
## birdnet_recording.service.
## Set this to Y or y to enable recording.
DO_RECORDING=y
## REC_CARD is the sound card you would want the birdnet_recording.service to
## use. This setting is irrelevant if you are not planning on doing data
## collection via recording on this machine. The command substitution below
## looks for a USB microphone's dsnoop alsa device. The dsnoop device lets
## birdnet_recording.service and livestream.service share the raw audio stream
## from the microphone. If you would like to use a different microphone than
## what this produces, or if your microphone does not support creating a
## dsnoop device, you can set this explicitly from a list of the available
## devices from the output of running 'aplay -L'
REC_CARD=default
## PROCESSED is the directory where the formerly 'Analyzed' files are moved
## after extractions have been made from them. This includes both WAVE and
## BirdNET.selection.txt files.
PROCESSED=/home/pi/BirdSongs/Processed
## EXTRACTED is the directory where the extracted audio selections are moved.
EXTRACTED=/home/pi/BirdSongs/Extracted
## IDFILE is the file that keeps a complete list of every spececies that
## BirdNET has identified from your data-set. It is persistent across
## data-sets, so would need to be whiped clean through deleting or renaming
## it. A backup is automatically made from this variable each time it is
## updated (structure: ${IDFILE}.bak), and would also need to be removed
## or renamed to start a new file between data-sets. Alternately, you can
## change this variable between data-sets to preserve records of disparate
## data-sets according to name.
IDFILE=${HOME}/BirdNET-Pi/IdentifiedSoFar.txt
## OVERLAP is the value in seconds which BirdNET should use when analyzing
## the data. The values must be between 0.0-2.9.
OVERLAP=0.0
## CONFIDENCE is the minimum confidence level from 0.0-1.0 BirdNET's analysis
## should reach before creating an entry in the BirdNET.selection.txt file.
## Don't set this to 1.0 or you won't have any results.
CONFIDENCE=0.7
## SENSITIVITY is the detection sensitivity from 0.5-1.5.
SENSITIVITY=1.25
## CHANNELS holds the variabel that corresponds to the number of channels the
## sound card supports.
CHANNELS=2
## FULL_DISK can be set to configure how the system reacts to a full disk
## 0 = Remove the oldest day's worth of recordings
## 1 = Keep all data and 'stop_core_services.sh'
FULL_DISK=0
## VENV is the virtual environment where the the BirdNET python build is found,
## i.e, VENV is the virtual environment miniforge built for BirdNET.
VENV=/home/pi/BirdNET-Pi/birdnet
## RECORDING_LENGTH sets the length of the recording that BirdNET-Lite will analyze.
RECORDING_LENGTH=
## EXTRACTION_LENGTH sets the length of the audio extractions that will be made
## from each BirdNET-Lite detection.
EXTRACTION_LENGTH=
## BIRDNET_USER should be the non-root user systemd should use to execute each
## service.
BIRDNET_USER=pi
## These are just for debugging
LAST_RUN=
THIS_RUN=
EOF
[ -d /etc/birdnet ] || sudo mkdir /etc/birdnet
sudo ln -sf ${my_dir}/birdnet.conf /etc/birdnet/birdnet.conf
}
if [ ! -f ${HOME}/stage_1_complete ] ;then
stage_1
stage_2
else
stage_2
fi
Birders_Guide_Installer_Configuration.txt
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# Birders Guide Installer Configuration File
################################################################################
# Fill this out in order to install BirdNET-Lite
# Follow the instructions for each section.
################################################################################
# 1. To find your latitude and longitude, you can go to https://maps.google.com
# 1a. Find the location on the map where you will be putting the BirdNET-Lite
# 1b. Right-click the location to view the latitude and longitude and click
# them to copy them to your clip-board.
# 2. Enter the latitude and longitude here. Be certain not to mix them up.
# The first number is the latitude, and the second is longitude. See the
# example below.
#
# Example: these coordinates would indicate the Eiffel Tower in Paris, France.
# LATITUDE=48.858
# LONGITUDE=2.294
LATITUDE=
LONGITUDE=
# 1. CADDY_PWD is the password you will use to access your live audio stream and
# maintenance tools. You can set this to anything, but keep it alpha-numeric.
# You will probably also want to write this one down if you ever plan to
# listen to the live stream.
# 2. ICE_PWD is the password that IceCast2 will use to authenticate the stream
# source.You can set this to anything also, but keep it alpha-numeric. You
# will never use this again, so just set it to your favorite word.
CADDY_PWD=
ICE_PWD=
# DB_PWD is the password that the system will use to access the database. Set
# this to anything you want.
DB_PWD=
# This section can be left alone. If you setup a Pushed.co
# mobile application, you can enter the App secret and secret
# key in order to enable phone notifications for new species
# detections.
PUSHED_APP_SECRET=
PUSHED_APP_KEY=
# If you own your own domain, you can input that here to have caddy register
# TLS certificates for the web interface
BIRDNETPI_URL=
BIRDNETLOG_URL=
EXTRACTIONLOG_URL=
# If you would like to POST your BirdNET-Pi detections to
# https://app.birdweather.com, reach out to github:@timsterc for a unique and
# confidential BirdWeather ID. Place that here if you have one already.
# You can always add this later and the system will immediately start POSTing.
BIRDWEATHER_ID=
README.md
+13 -12
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@@ -1,5 +1,5 @@
<h1 align="center">
BirdNET-Pi <img src="https://img.shields.io/badge/version-0.11-orange" />
BirdNET-Pi <img src="https://img.shields.io/badge/version-0.11.1-orange" />
</h1>
<p align="center">
A realtime acoustic bird classification system for the Raspberry Pi 4B
@@ -37,6 +37,9 @@ If your installation isn't in one of the countries listed above, please let me k
* 24/7 recording and BirdNET-Lite analysis
* [BirdWeather](https://app.birdweather.com) integration (you will need to be issued a BirdWeather ID -- for now, request that from [@timsterc here](https://github.com/mcguirepr89/BirdNET-Pi/discussions/82))
* Web interface access to all data and logs
* Web Terminal
* [Tiny File Manager](https://tinyfilemanager.github.io/)
* FTP server included
* Automatic extraction of detected data (creating audio clips of detected bird sounds)
* Spectrograms available for all extractions
* MariaDB integration
@@ -47,27 +50,25 @@ If your installation isn't in one of the countries listed above, please let me k
* Localization supported
## Requirements
* A Raspberry Pi 4B
* An SD Card with the 64-bit version of RaspiOS installed (please use Bullseye) [(download the latest here)](https://downloads.raspberrypi.org/raspios_arm64/images/)
* A Raspberry Pi 4B or Raspberry Pi 3B[+] (must run on RaspiOS-ARM64-Lite)
* An SD Card with the 64-bit version of RaspiOS installed (please use Bullseye) -- Lite is recommended, but the installation works on RaspiOS-ARM64-Full as well. [(Download the latest here)](https://downloads.raspberrypi.org/raspios_lite_arm64/images/)
* A USB Microphone or Sound Card
## Installation
Headless installation guide available [HERE](https://github.com/mcguirepr89/BirdNET-Pi/wiki/%22Headless%22-installation-using-VNC)<br>
Pre-installeld beta image available for testing [HERE](https://github.com/mcguirepr89/BirdNET-Pi/discussions/11#discussioncomment-1751201)
[An installation guide is available here](https://github.com/mcguirepr89/BirdNET-Pi/wiki/Installation-Guide).
The system can be installed with:
```
curl -s https://raw.githubusercontent.com/mcguirepr89/BirdNET-Pi/main/newinstaller.sh | bash
curl -s https://raw.githubusercontent.com/mcguirepr89/BirdNET-Pi/main/newinstaller.sh | bash | tee -a installation.log 2>&1 && sudo reboot
```
The installer takes care of any and all necessary updates, so you can run that as the very first command upon the first boot, if you'd like.
The installation creates a log in `/home/pi/installation.log` that you can [email me](mailto:mcguirepr89@gmail.com) if you encounter any issues during installation.
## Access
The BirdNET-Pi system can be accessed from any web browser on the same network:
- http://birdnetpi.local
#### Access Credentials:
- Username:`birdnet`
- Password: The "CADDY_PWD" password set during installation
## Uninstallation
```
/usr/local/bin/uninstall.sh && cd ~ && rm -drf BirdNET-Pi
@@ -87,7 +88,7 @@ I hope that if you find BirdNET-Pi has been worth your time, you will share your
## ToDo, Notes, and Coming Soon
### Internationalization:
The bird names are in English by default, but other localized versions are available thanks to the wonderful efforts of [@patlevin](https://github.com/patlevin). Please unzip `model/labels_l18n.zip` and replace `model/labels.txt` with your corresponding language. For instance, if you want the Swedish labels, rename the current `labels.txt` to `labels_en.txt` and then rename `labels_sv.txt` to `labels.txt`. (I will make this more straightforward in the future.)
The bird names are in English by default, but other localized versions are available thanks to the wonderful efforts of [@patlevin](https://github.com/patlevin). Use the web interface's "Tools" > "Settings" and select your "Database Language" to have the detections in your language.
### Realtime Analysis Predictions View
The pre-built TFLite binaries for this project also support [the BirdNET-Demo](https://github.com/kahst/BirdNET-Demo), which I am currently testing for integration into the BirdNET-Pi. If you know anything about JavaScript and are willing to help, please let me know in the [Live Analysis discussion](https://github.com/mcguirepr89/BirdNET-Pi/discussions/24).
@@ -101,7 +102,7 @@ Expect FULL internationalization options during installation (and available post
- French
- Spanish
and detection/database localization for the following languages:
Current database languages include the list below:
| Language | Missing Species out of 6,362 | Missing labels (%) |
| -------- | ------- | ------ |
| Afrikaans | 5774 | 90.76% |
analyze.py
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# BirdWeather edits by @timsterc
# Other edits by @CaiusX and @mcguirepr89
import os
os.environ['TF_CPP_MIN_LOG_LEVEL'] = '3'
os.environ['CUDA_VISIBLE_DEVICES'] = ''
try:
import tflite_runtime.interpreter as tflite
except:
from tensorflow import lite as tflite
import argparse
import operator
import librosa
import numpy as np
import math
import time
from decimal import Decimal
import json
###############################################################################
import requests
import mysql.connector
###############################################################################
import datetime
import pytz
from tzlocal import get_localzone
from pathlib import Path
def loadModel():
global INPUT_LAYER_INDEX
global OUTPUT_LAYER_INDEX
global MDATA_INPUT_INDEX
global CLASSES
print('LOADING TF LITE MODEL...', end=' ')
# Load TFLite model and allocate tensors.
interpreter = tflite.Interpreter(model_path='model/BirdNET_6K_GLOBAL_MODEL.tflite',num_threads=2)
interpreter.allocate_tensors()
# Get input and output tensors.
input_details = interpreter.get_input_details()
output_details = interpreter.get_output_details()
# Get input tensor index
INPUT_LAYER_INDEX = input_details[0]['index']
MDATA_INPUT_INDEX = input_details[1]['index']
OUTPUT_LAYER_INDEX = output_details[0]['index']
# Load labels
CLASSES = []
with open('model/labels.txt', 'r') as lfile:
for line in lfile.readlines():
CLASSES.append(line.replace('\n', ''))
print('DONE!')
return interpreter
def loadCustomSpeciesList(path):
slist = []
if os.path.isfile(path):
with open(path, 'r') as csfile:
for line in csfile.readlines():
slist.append(line.replace('\r', '').replace('\n', ''))
return slist
def splitSignal(sig, rate, overlap, seconds=3.0, minlen=1.5):
# Split signal with overlap
sig_splits = []
for i in range(0, len(sig), int((seconds - overlap) * rate)):
split = sig[i:i + int(seconds * rate)]
# End of signal?
if len(split) < int(minlen * rate):
break
# Signal chunk too short? Fill with zeros.
if len(split) < int(rate * seconds):
temp = np.zeros((int(rate * seconds)))
temp[:len(split)] = split
split = temp
sig_splits.append(split)
return sig_splits
def readAudioData(path, overlap, sample_rate=48000):
print('READING AUDIO DATA...', end=' ', flush=True)
# Open file with librosa (uses ffmpeg or libav)
sig, rate = librosa.load(path, sr=sample_rate, mono=True, res_type='kaiser_fast')
# Split audio into 3-second chunks
chunks = splitSignal(sig, rate, overlap)
print('DONE! READ', str(len(chunks)), 'CHUNKS.')
return chunks
def convertMetadata(m):
# Convert week to cosine
if m[2] >= 1 and m[2] <= 48:
m[2] = math.cos(math.radians(m[2] * 7.5)) + 1
else:
m[2] = -1
# Add binary mask
mask = np.ones((3,))
if m[0] == -1 or m[1] == -1:
mask = np.zeros((3,))
if m[2] == -1:
mask[2] = 0.0
return np.concatenate([m, mask])
def custom_sigmoid(x, sensitivity=1.0):
return 1 / (1.0 + np.exp(-sensitivity * x))
def predict(sample, interpreter, sensitivity):
# Make a prediction
interpreter.set_tensor(INPUT_LAYER_INDEX, np.array(sample[0], dtype='float32'))
interpreter.set_tensor(MDATA_INPUT_INDEX, np.array(sample[1], dtype='float32'))
interpreter.invoke()
prediction = interpreter.get_tensor(OUTPUT_LAYER_INDEX)[0]
# Apply custom sigmoid
p_sigmoid = custom_sigmoid(prediction, sensitivity)
# Get label and scores for pooled predictions
p_labels = dict(zip(CLASSES, p_sigmoid))
# Sort by score
p_sorted = sorted(p_labels.items(), key=operator.itemgetter(1), reverse=True)
# Remove species that are on blacklist
for i in range(min(10, len(p_sorted))):
if p_sorted[i][0] in ['Human_Human', 'Non-bird_Non-bird', 'Noise_Noise']:
p_sorted[i] = (p_sorted[i][0], 0.0)
# Only return first the top ten results
return p_sorted[:10]
def analyzeAudioData(chunks, lat, lon, week, sensitivity, overlap, interpreter):
detections = {}
start = time.time()
print('ANALYZING AUDIO...', end=' ', flush=True)
# Convert and prepare metadata
mdata = convertMetadata(np.array([lat, lon, week]))
mdata = np.expand_dims(mdata, 0)
# Parse every chunk
pred_start = 0.0
for c in chunks:
# Prepare as input signal
sig = np.expand_dims(c, 0)
# Make prediction
p = predict([sig, mdata], interpreter, sensitivity)
# Save result and timestamp
pred_end = pred_start + 3.0
detections[str(pred_start) + ';' + str(pred_end)] = p
pred_start = pred_end - overlap
print('DONE! Time', int((time.time() - start) * 10) / 10.0, 'SECONDS')
return detections
def writeResultsToFile(detections, min_conf, path):
print('WRITING RESULTS TO', path, '...', end=' ')
rcnt = 0
with open(path, 'w') as rfile:
rfile.write('Start (s);End (s);Scientific name;Common name;Confidence\n')
for d in detections:
for entry in detections[d]:
if entry[1] >= min_conf and (entry[0] in WHITE_LIST or len(WHITE_LIST) == 0):
rfile.write(d + ';' + entry[0].replace('_', ';') + ';' + str(entry[1]) + '\n')
rcnt += 1
print('DONE! WROTE', rcnt, 'RESULTS.')
def main():
global WHITE_LIST
# Parse passed arguments
parser = argparse.ArgumentParser()
parser.add_argument('--i', help='Path to input file.')
parser.add_argument('--o', default='result.csv', help='Path to output file. Defaults to result.csv.')
parser.add_argument('--lat', type=float, default=-1, help='Recording location latitude. Set -1 to ignore.')
parser.add_argument('--lon', type=float, default=-1, help='Recording location longitude. Set -1 to ignore.')
parser.add_argument('--week', type=int, default=-1, help='Week of the year when the recording was made. Values in [1, 48] (4 weeks per month). Set -1 to ignore.')
parser.add_argument('--overlap', type=float, default=0.0, help='Overlap in seconds between extracted spectrograms. Values in [0.0, 2.9]. Defaults tp 0.0.')
parser.add_argument('--sensitivity', type=float, default=1.0, help='Detection sensitivity; Higher values result in higher sensitivity. Values in [0.5, 1.5]. Defaults to 1.0.')
parser.add_argument('--min_conf', type=float, default=0.1, help='Minimum confidence threshold. Values in [0.01, 0.99]. Defaults to 0.1.')
parser.add_argument('--custom_list', default='', help='Path to text file containing a list of species. Not used if not provided.')
parser.add_argument('--birdweather_id', default='99999', help='Private Station ID for BirdWeather.')
args = parser.parse_args()
# Load model
interpreter = loadModel()
# Load custom species list
if not args.custom_list == '':
WHITE_LIST = loadCustomSpeciesList(args.custom_list)
else:
WHITE_LIST = []
birdweather_id = args.birdweather_id
# Read audio data
audioData = readAudioData(args.i, args.overlap)
# Get Date/Time from filename in case Pi gets behind
#now = datetime.now()
full_file_name = args.i
file_name = Path(full_file_name).stem
file_date = file_name.split('-birdnet-')[0]
file_time = file_name.split('-birdnet-')[1]
date_time_str = file_date + ' ' + file_time
date_time_obj = datetime.datetime.strptime(date_time_str, '%Y-%m-%d %H:%M:%S')
#print('Date:', date_time_obj.date())
#print('Time:', date_time_obj.time())
print('Date-time:', date_time_obj)
now = date_time_obj
current_date = now.strftime("%Y/%m/%d")
current_time = now.strftime("%H:%M:%S")
current_iso8601 = now.astimezone(get_localzone()).isoformat()
week_number = int(now.strftime("%V"))
week = max(1, min(week_number, 48))
sensitivity = max(0.5, min(1.0 - (args.sensitivity - 1.0), 1.5))
# Process audio data and get detections
detections = analyzeAudioData(audioData, args.lat, args.lon, week, sensitivity, args.overlap, interpreter)
# Write detections to output file
min_conf = max(0.01, min(args.min_conf, 0.99))
writeResultsToFile(detections, min_conf, args.o)
###############################################################################
###############################################################################
soundscape_uploaded = False
# Write detections to Database
for i in detections:
print("\n", detections[i][0],"\n")
with open('BirdDB.txt', 'a') as rfile:
for d in detections:
print("\n", "Database Entry", "\n")
for entry in detections[d]:
if entry[1] >= min_conf and (entry[0] in WHITE_LIST or len(WHITE_LIST) == 0):
rfile.write(str(current_date) + ';' + str(current_time) + ';' + entry[0].replace('_', ';') + ';' \
+ str(entry[1]) +";" + str(args.lat) + ';' + str(args.lon) + ';' + str(min_conf) + ';' + str(week) + ';' \
+ str(sensitivity) +';' + str(args.overlap) + '\n')
def insert_variables_into_table(Date, Time, Sci_Name, Com_Name, Confidence, Lat, Lon, Cutoff, Week, Sens, Overlap):
try:
connection = mysql.connector.connect(host='localhost',
database='birds',
user='birder',
password='databasepassword')
cursor = connection.cursor()
mySql_insert_query = """INSERT INTO detections (Date, Time, Sci_Name, Com_Name, Confidence, Lat, Lon, Cutoff, Week, Sens, Overlap)
VALUES (%s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s) """
record = (Date, Time, Sci_Name, Com_Name, Confidence, Lat, Lon, Cutoff, Week, Sens, Overlap)
cursor.execute(mySql_insert_query, record)
connection.commit()
print("Record inserted successfully into detections table")
except mysql.connector.Error as error:
print("Failed to insert record into detections table {}".format(error))
finally:
if connection.is_connected():
connection.close()
print("MySQL connection is closed")
species = entry[0]
sci_name,com_name = species.split('_')
insert_variables_into_table(str(current_date), str(current_time), sci_name, com_name, \
str(entry[1]), str(args.lat), str(args.lon), str(min_conf), str(week), \
str(args.sensitivity), str(args.overlap))
print(str(current_date) + ';' + str(current_time) + ';' + entry[0].replace('_', ';') + ';' + str(entry[1]) +";" + str(args.lat) + ';' + str(args.lon) + ';' + str(min_conf) + ';' + str(week) + ';' + str(args.sensitivity) +';' + str(args.overlap) + '\n')
if birdweather_id != "99999":
if soundscape_uploaded is False:
# POST soundscape to server
soundscape_url = "https://app.birdweather.com/api/v1/stations/" + birdweather_id + "/soundscapes" + "?timestamp=" + current_iso8601
with open(args.i, 'rb') as f:
wav_data = f.read()
response = requests.post(url=soundscape_url, data=wav_data, headers={'Content-Type': 'application/octet-stream'})
print("Soundscape POST Response Status - ", response.status_code)
sdata = response.json()
soundscape_id = sdata['soundscape']['id']
soundscape_uploaded = True
# POST detection to server
detection_url = "https://app.birdweather.com/api/v1/stations/" + birdweather_id + "/detections"
start_time = d.split(';')[0]
end_time = d.split(';')[1]
post_begin = "{ "
now_p_start = now + datetime.timedelta(seconds=float(start_time))
current_iso8601 = now_p_start.astimezone(get_localzone()).isoformat()
post_timestamp = "\"timestamp\": \"" + current_iso8601 + "\","
post_lat = "\"lat\": " + str(args.lat) + ","
post_lon = "\"lon\": " + str(args.lon) + ","
post_soundscape_id = "\"soundscapeId\": " + str(soundscape_id) + ","
post_soundscape_start_time = "\"soundscapeStartTime\": " + start_time + ","
post_soundscape_end_time = "\"soundscapeEndTime\": " + end_time + ","
post_commonName = "\"commonName\": \"" + entry[0].split('_')[1] + "\","
post_scientificName = "\"scientificName\": \"" + entry[0].split('_')[0] + "\","
post_algorithm = "\"algorithm\": " + "\"alpha\"" + ","
post_confidence = "\"confidence\": " + str(entry[1])
post_end = " }"
post_json = post_begin + post_timestamp + post_lat + post_lon + post_soundscape_id + post_soundscape_start_time + post_soundscape_end_time + post_commonName + post_scientificName + post_algorithm + post_confidence + post_end
print(post_json)
response = requests.post(detection_url, json=json.loads(post_json))
print("Detection POST Response Status - ", response.status_code)
#time.sleep(3)
###############################################################################
###############################################################################
if __name__ == '__main__':
main()
# Example calls
# python3 analyze.py --i 'example/XC558716 - Soundscape.mp3' --lat 35.4244 --lon -120.7463 --week 18
# python3 analyze.py --i 'example/XC563936 - Soundscape.mp3' --lat 47.6766 --lon -122.294 --week 11 --overlap 1.5 --min_conf 0.25 --sensitivity 1.25 --custom_list 'example/custom_species_list.txt'
birdnet.conf-defaults
+38 -43
View File
@@ -2,33 +2,26 @@
# Configuration settings for BirdNET-Pi #
################################################################################
############ CHANGE THE LATITUDE AND LONGITUDE TO STATIC VALUES ################
#--------------------- Required: Latitude, and Longitude ----------------------#
## The shell substitution below guesses these based on your network. THESE NEED
## TO BE CHANGED TO STATIC VALUES
## Please only go to 4 decimal places. Example:43.3984
## LATITUDE and LONGITUDE are self-explanatroy. Find them easily at
## maps.google.com.
## Example: these coordinates would indicate the Eiffel Tower in Paris, France.
## LATITUDE=48.858
## LONGITUDE=2.294
## These are input as shell substitutions so that this will work out of the box.
## It guesses your latitude and longitude based off of your network information.
## THESE SHOULD BE CHANGED TO STATIC NUMBERS!!!!
LATITUDE="$(curl -s4 ifconfig.co/json | awk '/lat/ {print $2}' | tr -d ',')"
LONGITUDE="$(curl -s4 ifconfig.co/json | awk '/lon/ {print $2}' | tr -d ',')"
## RECS_DIR is the location birdnet_analysis.service will look for the data-set
## it needs to analyze. Be sure this directory is readable and writable for
## the BIRDNET_USER. If you are going to be accessing a remote data-set, you
## still need to set this, as this will be where the remote directory gets
## mounted locally.
RECS_DIR=/home/pi/BirdSongs
#--------------------- BirdWeather Station Information -----------------------#
#_____________The variable below can be set to have your BirdNET-Pi____________#
#__________________also act as a BirdWeather listening station_________________#
BIRDWEATHER_ID=
#----------------------- Web Interface User Password ------------------------#
#____________________The variable below sets the 'birdnet'_____________________#
#___________________user password for the live audio stream,___________________#
#_________________web tools, system info, and processed files__________________#
#___________________user password for the Live Audio Stream,___________________#
#_________________Tools, System Links, and the Processed files ________________#
## CADDY_PWD is the plaintext password (that will be hashed) and used to access
## certain parts of the web interface
@@ -39,7 +32,8 @@ CADDY_PWD=
#_____________The variable below sets the password for the_____________________#
#_______________________'birder' user on the MariaDB___________________________#
## DB_PWD is for the 'birder' user
## DB_PWD is for the 'birder' user. The shell substitution below sets a random
## password for you during installation.
DB_PWD=$(< /dev/urandom tr -dc _A-Z-a-z-0-9 | head -c${1:-32};echo;)
#------------------------- Live Audio Stream --------------------------------#
@@ -49,16 +43,10 @@ DB_PWD=$(< /dev/urandom tr -dc _A-Z-a-z-0-9 | head -c${1:-32};echo;)
## ICE_PWD is the password that icecast2 will use to authenticate ffmpeg as a
## trusted source for the stream. You will never need to enter this manually
## anywhere other than here.
## anywhere other than here and it stays on 'localhost.'
ICE_PWD=birdnetpi
#--------------------- BirdWeather Station Information -----------------------#
#_____________The variable below can be set to have your BirdNET-Pi____________#
#__________________also act as a BirdWeather listening station_________________#
BIRDWEATHER_ID=
#----------------------- Web-hosting/Caddy File-server -----------------------#
#________The four variables below can be set to enable internet access_________#
#____________to your data,(e.g., extractions, raw data, live___________________#
@@ -70,8 +58,8 @@ BIRDWEATHER_ID=
## the BirdNET-Pi on your local network, keep this EMPTY.
BIRDNETPI_URL=
EXTRACTIONLOG_URL=
BIRDNETLOG_URL=
WEBTERMINAL_URL=
#------------------- Mobile Notifications via Pushed.co ---------------------#
@@ -90,19 +78,11 @@ PUSHED_APP_SECRET=
#-------------------------------- Defaults ----------------------------------#
################################################################################
#------------------------------- NoMachine ----------------------------------#
#_____________The variable below can be set include NoMachine__________________#
#_________________remote desktop software to be installed._____________________#
## RECS_DIR is the location birdnet_analysis.service will look for the data-set
## it needs to analyze. Be sure this directory is readable and writable for
## the BIRDNET_USER.
# Keep this EMPTY if you do not want to install NoMachine. #
## INSTALL_NOMACHINE is simply a setting that can be enabled to install
## NoMachine alongside the BirdNET-Pi for remote desktop access. This in-
## staller assumes personal use. Please reference the LICENSE file included
## in this repository for more information.
## Set this to Y or y to install NoMachine alongside the BirdNET-Lite
INSTALL_NOMACHINE=y
RECS_DIR=/home/pi/BirdSongs
#
#------------------------------ Extraction Service ---------------------------#
@@ -176,10 +156,10 @@ SENSITIVITY=1.25
CHANNELS=2
## FULL_DISK can be set to configure how the system reacts to a full disk
## 0 = Remove the oldest day's worth of recordings
## 1 = Keep all data and `stop_core_services.sh`
## purge = Remove the oldest day's worth of recordings
## keep = Keep all data and 'stop_core_services.sh'
FULL_DISK=0
FULL_DISK=purge
## VENV is the virtual environment where the the BirdNET python build is found,
## i.e, VENV is the virtual environment miniforge built for BirdNET.
@@ -187,7 +167,7 @@ FULL_DISK=0
VENV=/home/pi/BirdNET-Pi/birdnet
## RECORDING_LENGTH sets the length of the recording that BirdNET-Lite will analyze.
RECORDING_LENGTH=
RECORDING_LENGTH=15
## EXTRACTION_LENGTH sets the length of the audio extractions that will be made
## from each BirdNET-Lite detection.
@@ -202,3 +182,18 @@ BIRDNET_USER=pi
## These are just for debugging
LAST_RUN=
THIS_RUN=
## DEPRECATED
#------------------------------- NoMachine ----------------------------------#
#_____________The variable below can be set include NoMachine__________________#
#_________________remote desktop software to be installed._____________________#
# Keep this EMPTY if you do not want to install NoMachine. #
## INSTALL_NOMACHINE is simply a setting that can be enabled to install
## NoMachine alongside the BirdNET-Pi for remote desktop access. This in-
## staller assumes personal use. Please reference the LICENSE file included
## in this repository for more information.
## Set this to Y or y to install NoMachine alongside the BirdNET-Lite
INSTALL_NOMACHINE=y
homepage/form.html
-84
View File
@@ -1,84 +0,0 @@
<html>
<head>
<title>Configure `birdnet.conf`</title>
<style>
* {
font-family: 'Arial', 'Gill Sans', 'Gill Sans MT',
' Calibri', 'Trebuchet MS', 'sans-serif';
}
h1,h2,h3 {
text-align:center;
}
input {
font-size:large;
}
</style>
</head>
<h1>Configure BirdNET-Pi</h1>
<body style="background-color: rgb(119, 196, 135);">
<form style="text-align:center;" action="write_config.php" method="POST">
<h3>Required</h3>
<input name="field1" type="text" value="LATITUDE" />
<input name="field2" type="text" /><br>
<input name="field3" type="text" value="LONGITUDE" />
<input name="field4" type="text" /><br>
<input name="field5" type="text" value="CADDY_PWD" />
<input name="field6" type="text" value="changeme" /><br>
<input name="field7" type="text" value="DB_PWD" />
<input name="field8" type="text" value="changeme" /><br>
<input name="field9" type="text" value="ICE_PWD" />
<input name="field10" type="text" value="changeme" /><br>
<input type="submit" name="submit" value="Save Settings">
</form>
<form style="text-align:center;" action="write_config.php" method="POST">
<h3>Optional Services</h3>
<input name="field11" type="text" value="BIRDWEATHER_ID" />
<input name="field12" type="text" /><br>
<input name="field13" type="text" value="PUSHED_APP_KEY" />
<input name="field14" type="text" /><br>
<input name="field15" type="text" value="PUSHED_APP_SECRET" />
<input name="field16" type="text" /><br>
<input type="submit" name="submit" value="Save Settings">
</form>
<form style="text-align:center;" action="write_config.php" method="POST">
<h3>Custom URLs</h3>
<input name="field17" type="text" value="BIRDNETPI_URL" />
<input name="field18" type="text" /><br>
<input name="field19" type="text" value="EXTRACTIONLOG_URL" />
<input name="field20" type="text" /><br>
<input name="field21" type="text" value="BIRDNETLOG_URL" />
<input name="field22" type="text" /><br>
<input type="submit" name="submit" value="Save Settings">
</form>
<form style="text-align:center;" action="write_config.php" method="POST">
<h3>Default Services</h3>
<input name="field23" type="text" value="INSTALL_NOMACHINE" />
<input name="field24" type="text" value="y" /><br>
<input name="field25" type="text" value="DO_EXTRACTIONS" />
<input name="field26" type="text" value="y" /><br>
<input name="field27" type="text" value="DO_RECORDING" />
<input name="field28" type="text" value="y" /><br>
<input type="submit" name="submit" value="Save Settings">
</form>
<form style="text-align:center;" action="write_config.php" method="POST">
<h3>Advanced Configuration</h3>
<input name="field29" type="text" value="REC_CARD" />
<input name="field30" type="text" value="default" /><br>
<input name="field31" type="text" value="OVERLAP" />
<input name="field32" type="text" value="0.0" /><br>
<input name="field33" type="text" value="CONFIDENCE" />
<input name="field34" type="text" value="0.7" /><br>
<input name="field35" type="text" value="SENSITIVITY" />
<input name="field36" type="text" value="1.25" /><br>
<input name="field37" type="text" value="CHANNELS" />
<input name="field38" type="text" value="2" /><br>
<input name="field39" type="text" value="RECORDING_LENGTH" />
<input name="field40" type="text" value="15" /><br>
<input name="field41" type="text" value="EXTRACTION_LENGTH" />
<input name="field42" type="text" value="6" /><br>
<input type="submit" name="submit" value="Save Settings">
</form>
<a style="font-weight:bold;color:black;" href='phpconfig.txt'>View Current Config</a>
</body>
homepage/form.php
-24
View File
@@ -1,24 +0,0 @@
<?php
if($_POST['Submit']){
$open = fopen("scripts/birdnet.conf","w+");
$text = $_POST['update'];
fwrite($open, $text);
fclose($open);
echo "File updated.<br />";
echo "File:<br />";
$file = file("scripts/birdnet.conf");
foreach($file as $text) {
echo $text."<br />";
}
}else{
$file = file("scripts/birdnet.conf");
echo "<form style=\"text-align:center;\" action=\"".$PHP_SELF."\" method=\"post\">";
echo "<textarea Name=\"update\" cols=\"80\" rows=\"100\">";
foreach($file as $text) {
echo $text;
}
echo "</textarea>";
echo "<input name=\"Submit\" type=\"submit\" value=\"Update\" />\n
</form>";
}
?>
homepage/menu.html
+15 -16
View File
@@ -21,7 +21,7 @@ h3 {
text-align: center;
}
h4,h5 {
text-align: center;
text-align: left;
margin: 0px 0px 5px 0px;
}
footer {
@@ -43,34 +43,33 @@ body::-webkit-scrollbar {
<body>
<h5>Extractions</h5>
- <a href="http://birdnetpi.local/By_Date/" target="content">By Date</a><br>
- <a href="http://birdnetpi.local/By_Common_Name/" target="content">By Common Name</a><br>
- <a href="http://birdnetpi.local/By_Scientific_Name/" target="content">By Scientific Name</a><br>
- <a href="http://birdnetpi.local/Processed/" target="content">Processed</a><br>
- <a href="/By_Date/" target="content">By Date</a><br>
- <a href="/By_Common_Name/" target="content">By Common Name</a><br>
- <a href="/By_Scientific_Name/" target="content">By Scientific Name</a><br>
- <a href="/Processed/" target="content">Processed</a><br>
<hr class="solid">
<h5>System Links</h5>
- <a href="http://birdnetpi.local/scripts/" target="content">Tools</a><br>
- <a href="http://birdnetpi.local/phpsysinfo/" target="content">System Info</a><br>
- <a href="http://birdnetpi.local:8080" target="content">BirdNET-Lite Log</a><br>
- <a href="http://birdnetpi.local:8888" target="content">Extraction Log</a><br>
<h5>System</h5>
- <a href="/scripts/" target="content">Tools</a><br>
- <a href="/phpsysinfo/" target="content">Info</a><br>
- <a href="http://birdnetpi.local:8080" target="content">Log</a><br>
<hr class="solid">
<h5>External Links</h5>
<h5>External</h5>
- <a href="https://app.birdweather.com" target="_content">BirdWeather</a><br>
- <a href="https://github.com/mcguirepr89/BirdNET-Pi" target="_content">Repository</a><br>
- <a href="https://github.com/mcguirepr89/BirdNET-Pi/wiki" target="_content">Wiki Help Page</a><br>
- <a href="https://v2.wttr.in/" target="content">Wttr.in Report</a><br>
- <a href="https://birdnet.cornell.edu" target="_content">BirdNET @ Cornell</a><br>
- <a href="https://birdnet.cornell.edu" target="_content">BirdNET</a><br>
<hr class="solid">
<h5>Other<br>BirdNET-Pis</h5>
- <a href="https://birdnetpi.pmcgui.xyz" target="_content">United States</a><br>
- <a href="https://birds.naturestation.net" target="_content">South Africa</a><br>
- <a href="https://birdnet.svardsten.se" target="_content">Sweden</a><br>
- <a href="https://birdnetgv.ddnss.de" target="_content">Germany</a>
- <a href="https://birdnetpi.pmcgui.xyz" target="top">United States</a><br>
- <a href="https://birds.naturestation.net" target="top">South Africa</a><br>
- <a href="https://birdnet.svardsten.se" target="top">Sweden</a><br>
- <a href="https://birdnetgv.ddnss.de" target="top">Germany</a>
</body>
<footer style="font-size: small;">
homepage/top.html
+3 -3
View File
@@ -42,9 +42,9 @@ footer {
<img style="padding-left: 150px;margin:0;" src="images/version.svg"/>
<p style="margin:0;padding-left:150px;padding-top:5px">
<a href="/overview.php" target="content">Overview</a> |
<a href="/viewdb.php" target="content">Database View</a> |
<a href="/viewday.php" target="content">Today View</a> |
<a href="/spectrogram.php" target="content">Spectrogram View</a>
<a href="/viewdb.php" target="content">Database</a> |
<a href="/viewday.php" target="content">Today</a> |
<a href="/spectrogram.php" target="content">Spectrogram</a>
</p>
</body>
</html>
homepage/write_config.php
-295
View File
@@ -1,295 +0,0 @@
<?php
if(isset($_POST['field1']) && isset($_POST['field2'])) {
$data = $_POST['field1'] . '=' . $_POST['field2'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field3']) && isset($_POST['field4'])) {
$data = $_POST['field3'] . '=' . $_POST['field4'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field5']) && isset($_POST['field6'])) {
$data = $_POST['field5'] . '=' . $_POST['field6'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field7']) && isset($_POST['field8'])) {
$data = $_POST['field7'] . '=' . $_POST['field8'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field9']) && isset($_POST['field10'])) {
$data = $_POST['field9'] . '=' . $_POST['field10'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field11']) && isset($_POST['field12'])) {
$data = $_POST['field11'] . '=' . $_POST['field12'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field13']) && isset($_POST['field14'])) {
$data = $_POST['field13'] . '=' . $_POST['field14'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field15']) && isset($_POST['field16'])) {
$data = $_POST['field15'] . '=' . $_POST['field16'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field17']) && isset($_POST['field18'])) {
$data = $_POST['field17'] . '=' . $_POST['field18'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field19']) && isset($_POST['field20'])) {
$data = $_POST['field19'] . '=' . $_POST['field20'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field21']) && isset($_POST['field22'])) {
$data = $_POST['field21'] . '=' . $_POST['field22'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field23']) && isset($_POST['field24'])) {
$data = $_POST['field23'] . '=' . $_POST['field24'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field25']) && isset($_POST['field26'])) {
$data = $_POST['field25'] . '=' . $_POST['field26'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field27']) && isset($_POST['field28'])) {
$data = $_POST['field27'] . '=' . $_POST['field28'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field29']) && isset($_POST['field30'])) {
$data = $_POST['field29'] . '=' . $_POST['field30'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field31']) && isset($_POST['field32'])) {
$data = $_POST['field31'] . '=' . $_POST['field32'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field33']) && isset($_POST['field34'])) {
$data = $_POST['field33'] . '=' . $_POST['field34'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field35']) && isset($_POST['field36'])) {
$data = $_POST['field35'] . '=' . $_POST['field36'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field37']) && isset($_POST['field38'])) {
$data = $_POST['field37'] . '=' . $_POST['field38'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field39']) && isset($_POST['field40'])) {
$data = $_POST['field39'] . '=' . $_POST['field40'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
if(isset($_POST['field41']) && isset($_POST['field42'])) {
$data = $_POST['field41'] . '=' . $_POST['field42'] . "\r\n";
$ret = file_put_contents('/home/pi/BirdNET-Pi/phpconfig.txt', $data, FILE_APPEND | LOCK_EX);
if($ret === false) {
die('There was an error writing this file');
}
else {
echo "$ret bytes written to file";
}
}
else {
die('no post data to process');
}
newinstaller.sh
+2 -2
View File
@@ -7,6 +7,6 @@ if ! which git &> /dev/null;then
sudo apt update
sudo apt -y install git
fi
git clone -b ${branch} https://github.com/mcguirepr89/BirdNET-Pi.git ${HOME}/BirdNET-Pi
cp ${HOME}/BirdNET-Pi/birdnet.conf-defaults ${HOME}/BirdNET-Pi/birdnet.conf
git clone -b ${branch} https://github.com/mcguirepr89/BirdNET-Pi.git ${HOME}/BirdNET-Pi &&
cp ${HOME}/BirdNET-Pi/birdnet.conf-defaults ${HOME}/BirdNET-Pi/birdnet.conf &&
${HOME}/BirdNET-Pi/scripts/install_birdnet.sh
scripts/add_to_exclude.php
+14
View File
@@ -0,0 +1,14 @@
<?php
error_reporting(E_ALL);
ini_set('display_errors',1);
$file='/home/pi/BirdNET-Pi/exclude_species_list.txt';
$str=file_get_contents("$file");
$str = preg_replace("/(^[\r\n]*|[\r\n]+)[\s\t]*[\r\n]+/", "\n", $str);
file_put_contents("$file", "$str");
if (isset($_POST['species']))
foreach ($_POST['species'] as $selectedOption)
file_put_contents("/home/pi/BirdNET-Pi/exclude_species_list.txt", $selectedOption."\n", FILE_APPEND);
header("Location: {$_SERVER['HTTP_REFERER']}");
exit;
?>
scripts/add_to_include.php
+14
View File
@@ -0,0 +1,14 @@
<?php
error_reporting(E_ALL);
ini_set('display_errors',1);
$file='/home/pi/BirdNET-Pi/include_species_list.txt';
$str=file_get_contents("$file");
$str = preg_replace("/(^[\r\n]*|[\r\n]+)[\s\t]*[\r\n]+/", "\n", $str);
file_put_contents("$file", "$str");
if (isset($_POST['species']))
foreach ($_POST['species'] as $selectedOption)
file_put_contents("/home/pi/BirdNET-Pi/include_species_list.txt", $selectedOption."\n", FILE_APPEND);
header("Location: {$_SERVER['HTTP_REFERER']}");
exit;
?>
scripts/advanced.php
+63 -38
View File
@@ -1,5 +1,16 @@
<meta name="viewport" content="width=device-width, initial-scale=1">
<style>
/* Chrome, Safari, Edge, Opera */
input::-webkit-outer-spin-button,
input::-webkit-inner-spin-button {
-webkit-appearance: none;
margin: 0;
}
/* Firefox */
input[type=number] {
-moz-appearance: textfield;
}
* {
font-family: 'Arial', 'Gill Sans', 'Gill Sans MT',
' Calibri', 'Trebuchet MS', 'sans-serif';
@@ -14,7 +25,7 @@
width: calc(50% - 70px);
}
.second {
width: calc(50% - 30px);
width: calc(50% - 70px);
}
.
/* Clear floats after the columns */
@@ -32,12 +43,9 @@ a {
}
.block {
display: block;
font-weight: bold;
width:100%;
width:50%;
border: none;
background-color: #04AA6D;
padding: 20px 20px;
color: white;
padding: 10px 10px;
font-size: medium;
cursor: pointer;
text-align: center;
@@ -64,18 +72,20 @@ input {
text-align:center;
font-size:large;
}
@media screen and (max-width: 800px) {
h2 {
margin-bottom:0px;
@media screen and (max-width: 1000px) {
h2,h3 {
text-align:center;
} form {
text-align:left;
margin-left:0px;
}
}
form {
margin:0;
}
.column {
float: none;
width: 100%;
}
input, label {
width: 100%;
{
}
</style>
</head>
@@ -85,22 +95,34 @@ input {
<div class="column first">
<form action="write_advanced.php" method="POST">
<?php
if (file_exists('/home/pi/BirdNET-Pi/thisrun.txt')) {
$config = parse_ini_file('/home/pi/BirdNET-Pi/thisrun.txt');
$config = parse_ini_file('/home/pi/BirdNET-Pi/thisrun.txt');
} elseif (file_exists('/home/pi/BirdNET-Pi/firstrun.ini')) {
$config = parse_ini_file('/home/pi/BirdNET-Pi/firstrun.ini');
$config = parse_ini_file('/home/pi/BirdNET-Pi/firstrun.ini');
} ?>
<h3>Defaults</h3>
<label for="full_disk">Full Disk Behavior: </label>
<input name="full_disk" type="text" value="<?php print($config['FULL_DISK']);?>" required/><br>
<label>Full Disk Behavior: </label>
<label style="width:30%;" for="purge">
<input style="width:15%;" name="full_disk" type="radio" id="purge" value="purge"
<?php
if (strcmp($config['FULL_DISK'], "purge") == 0) {
echo "checked";
}?>>Purge</label>
<label style="width:30%;" for="keep">
<input style="width:15%" name="full_disk" type="radio" id="keep" value="keep"
<?php
if (strcmp($config['FULL_DISK'], "keep") == 0) {
echo "checked";
}?>>Keep</label>
<label for="rec_card">Audio Card: </label>
<input name="rec_card" type="text" value="<?php print($config['REC_CARD']);?>" required/><br>
<label for="channels">Audio Channels: </label>
<input name="channels" type="text" value="<?php print($config['CHANNELS']);?>" required/><br>
<input name="channels" type="number" min="1" max="32" step="1" value="<?php print($config['CHANNELS']);?>" required/><br>
<label for="recording_length">Recording Length: </label>
<input name="recording_length" type="text" value="<?php print($config['RECORDING_LENGTH']);?>" /><br>
<input name="recording_length" type="number" min="3" max="60" step="1" value="<?php print($config['RECORDING_LENGTH']);?>" required/><br>
<label for="extraction_length">Extraction Length: </label>
<input name="extraction_length" type="text" value="<?php print($config['EXTRACTION_LENGTH']);?>" /><br>
<input name="extraction_length" type="number" min="3" max="<?php print($config['RECORDING_LENGTH']);?>" value="<?php print($config['EXTRACTION_LENGTH']);?>" /><br>
<h3>Passwords</h3>
<label for="caddy_pwd">Webpage: </label>
<input name="caddy_pwd" type="text" value="<?php print($config['CADDY_PWD']);?>" /><br>
@@ -109,37 +131,40 @@ if (file_exists('/home/pi/BirdNET-Pi/thisrun.txt')) {
<label for="ice_pwd">Live Audio Stream: </label>
<input name="ice_pwd" type="text" value="<?php print($config['ICE_PWD']);?>" required/><br>
</div>
<div class="column first">
<div class="column second">
<h3>Custom URLs</h3>
<label for="birdnetpi_url">BirdNET-Pi URL: </label>
<input name="birdnetpi_url" type="text" value="<?php print($config['BIRDNETPI_URL']);?>" /><br>
<label for="extractionlog_url">Extraction Log URL: </label>
<input name="extractionlog_url" type="text" value="<?php print($config['EXTRACTIONLOG_URL']);?>" /><br>
<input name="birdnetpi_url" type="url" value="<?php print($config['BIRDNETPI_URL']);?>" /><br>
<label for="birdnetlog_url">BirdNET-Lite Log URL: </label>
<input name="birdnetlog_url" type="text" value="<?php print($config['BIRDNETLOG_URL']);?>" /><br>
<input name="birdnetlog_url" type="url" value="<?php print($config['BIRDNETLOG_URL']);?>" /><br>
<label for="webterminal_url">Web Terminal URL: </label>
<input name="webterminal_url" type="url" value="<?php print($config['WEBTERMINAL_URL']);?>" /><br>
<h3>BirdNET-Lite Settings</h3>
<label for="overlap">Overlap: </label>
<input name="overlap" type="text" value="<?php print($config['OVERLAP']);?>" required/><br>
<input name="overlap" type="number" min="0.0" max="2.9" step="0.1" value="<?php print($config['OVERLAP']);?>" required/><br>
<label for="confidence">Minimum Confidence: </label>
<input name="confidence" type="text" value="<?php print($config['CONFIDENCE']);?>" required/><br>
<input name="confidence" type="number" min="0.01" max="0.99" step="0.01" value="<?php print($config['CONFIDENCE']);?>" required/><br>
<label for="sensitivity">Sigmoid Sensitivity: </label>
<input name="sensitivity" type="text" value="<?php print($config['SENSITIVITY']);?>" required/><br>
<br>
<br>
<input type="submit" value="<?php
@session_start();
<input name="sensitivity" type="number" min="0.5" max="1.5" step="0.01" value="<?php print($config['SENSITIVITY']);?>" required/><br>
<br><br>
<button type="submit" class="block"><?php
@session_start();
if(isset($_SESSION['success'])){
echo "Success!";
unset($_SESSION['success']);
echo "Success!";
unset($_SESSION['success']);
} else {
echo "Update Settings";
echo "Update Settings";
}
?>">
?></button>
<br>
</form>
<form action="config.php" style="margin:0;">
<button type="submit" class="block">Basic Settings</button>
</form>
<br>
<br>
<button type="text"><a href="config.php">Basic Settings</a></button>
<form action="index.html" style="margin:0;">
<button type="submit" class="block">Tools</button>
</form>
</div>
</div>
scripts/analyze.py
+82
View File
@@ -0,0 +1,82 @@
import argparse
import socket
HEADER = 64
PORT = 5050
FORMAT = 'utf-8'
DISCONNECT_MESSAGE = "!DISCONNECT"
SERVER = "127.0.1.1"
ADDR = (SERVER, PORT)
client = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
client.connect(ADDR)
def send(msg):
message = msg.encode(FORMAT)
msg_length = len(message)
send_length = str(msg_length).encode(FORMAT)
send_length += b' ' * (HEADER - len(send_length))
client.send(send_length)
client.send(message)
print(client.recv(2048).decode(FORMAT))
def main():
global INCLUDE_LIST
global EXCLUDE_LIST
# Parse passed arguments
parser = argparse.ArgumentParser()
parser.add_argument('--i', help='Path to input file.')
parser.add_argument('--o', default='result.csv', help='Path to output file. Defaults to result.csv.')
parser.add_argument('--lat', type=float, default=-1, help='Recording location latitude. Set -1 to ignore.')
parser.add_argument('--lon', type=float, default=-1, help='Recording location longitude. Set -1 to ignore.')
parser.add_argument('--week', type=int, default=-1, help='Week of the year when the recording was made. Values in [1, 48] (4 weeks per month). Set -1 to ignore.')
parser.add_argument('--overlap', type=float, default=0.0, help='Overlap in seconds between extracted spectrograms. Values in [0.0, 2.9]. Defaults tp 0.0.')
parser.add_argument('--sensitivity', type=float, default=1.0, help='Detection sensitivity; Higher values result in higher sensitivity. Values in [0.5, 1.5]. Defaults to 1.0.')
parser.add_argument('--min_conf', type=float, default=0.1, help='Minimum confidence threshold. Values in [0.01, 0.99]. Defaults to 0.1.')
parser.add_argument('--include_list', default='null', help='Path to text file containing a list of included species. Not used if not provided.')
parser.add_argument('--exclude_list', default='null', help='Path to text file containing a list of excluded species. Not used if not provided.')
parser.add_argument('--birdweather_id', default='99999', help='Private Station ID for BirdWeather.')
args = parser.parse_args()
sockParams = ''
if args.i:
sockParams += 'i=' + args.i + '||'
if args.o:
sockParams += 'o=' + args.o + '||'
if args.birdweather_id:
sockParams += 'birdweather_id=' + args.birdweather_id + '||'
if args.include_list:
sockParams += 'include_list=' + args.include_list + '||'
if args.exclude_list:
sockParams += 'exclude_list=' + args.exclude_list + '||'
if args.overlap:
sockParams += 'overlap=' + str(args.overlap) + '||'
if args.week:
sockParams += 'week=' + str(args.week) + '||'
if args.sensitivity:
sockParams += 'sensitivity=' + str(args.sensitivity) + '||'
if args.min_conf:
sockParams += 'min_conf=' + str(args.min_conf) + '||'
if args.lat:
sockParams += 'lat=' + str(args.lat) + '||'
if args.lon:
sockParams += 'lon=' + str(args.lon) + '||'
send(sockParams)
send(DISCONNECT_MESSAGE)
#time.sleep(3)
###############################################################################
###############################################################################
if __name__ == '__main__':
main()
# Example calls
# python3 analyze.py --i 'example/XC558716 - Soundscape.mp3' --lat 35.4244 --lon -120.7463 --week 18
# python3 analyze.py --i 'example/XC563936 - Soundscape.mp3' --lat 47.6766 --lon -122.294 --week 11 --overlap 1.5 --min_conf 0.25 --sensitivity 1.25 --custom_list 'example/custom_species_list.txt'
scripts/birdnet-pi-config
+1 -1
View File
@@ -7,7 +7,7 @@
set -x
birdnetpi_dir=/home/pi/BirdNET-Pi
birders_config=${birdnetpi_dir}/Birders_Guide_Installer_Configuration.txt
branch=main
branch=forms
INTERACTIVE=True
ASK_TO_REBOOT=0
BLACKLIST=/etc/modprobe.d/raspi-blacklist.conf
scripts/birdnet_analysis.sh
+140 -28
View File
@@ -1,6 +1,6 @@
#!/usr/bin/env bash
# Runs BirdNET-Lite
#set -x
set -x
source /etc/birdnet/birdnet.conf
# Document this run's birdnet.conf settings
# Make a temporary file to compare the current birdnet.conf with
@@ -22,12 +22,26 @@ if ! diff ${LAST_RUN} ${THIS_RUN};then
echo "The birdnet.conf file has changed"
echo "Reloading services"
cat ${THIS_RUN} > ${LAST_RUN}
until restart_services.sh;do
sleep 1
done
sudo systemctl stop birdnet_recording.service
sudo rm -rf ${RECS_DIR}/$(date +%B-%Y/%d-%A)/*
fi
CUSTOM_LIST="/home/pi/BirdNET-Pi/custom_species_list.txt"
INCLUDE_LIST="/home/pi/BirdNET-Pi/include_species_list.txt"
EXCLUDE_LIST="/home/pi/BirdNET-Pi/exclude_species_list.txt"
if [ ! -f ${INCLUDE_LIST} ];then
touch ${INCLUDE_LIST} &&
chmod g+rw ${INCLUDE_LIST}
fi
if [ ! -f ${EXCLUDE_LIST} ];then
touch ${EXCLUDE_LIST} &&
chmod g+rw ${EXCLUDE_LIST}
fi
if [ "$(du ${INCLUDE_LIST} | awk '{print $1}')" -lt 4 ];then
INCLUDE_LIST=null
fi
if [ "$(du ${EXCLUDE_LIST} | awk '{print $1}')" -lt 4 ];then
EXCLUDE_LIST=null
fi
# Create an array of the audio files
# Takes one argument:
@@ -63,7 +77,7 @@ move_analyzed() {
# Uses one argument:
# - {DIRECTORY}
run_analysis() {
sleep .5
sleep .5
echo "Starting run_analysis() for ${1:19}"
@@ -80,30 +94,36 @@ run_analysis() {
WEEK="$(echo "${WEEK_OF_YEAR} + 4" |bc -l)"
fi
cd ${HOME}/BirdNET-Pi || exit 1
cd ${HOME}/BirdNET-Pi/scripts || exit 1
for i in "${files[@]}";do
echo "${1}/${i}" > ./analyzing_now.txt
echo "${1}/${i}" > ../analyzing_now.txt
[ -z ${RECORDING_LENGTH} ] && RECORDING_LENGTH=15
[ ${RECORDING_LENGTH} == "60" ] && RECORDING_LENGTH=01:00
FILE_LENGTH="$(ffmpeg -i ${1}/${i} 2>&1 | awk -F. '/Duration/ {print $1}' | cut -d':' -f3-4)"
[ -z $FILE_LENGTH ] && sleep 3 && continue
[ -z $FILE_LENGTH ] && sleep 1 && continue
echo "RECORDING_LENGTH set to ${RECORDING_LENGTH}"
a=1
a=0
if [ "${RECORDING_LENGTH}" == "01:00" ];then
until [ "$(ffmpeg -i ${1}/${i} 2>&1 | awk -F. '/Duration/ {print $1}' | cut -d':' -f3-4)" == "${RECORDING_LENGTH}" ];do
sleep 1
[ $a -ge 60 ] && sudo rm -f ${1}/${i} && break
[ $a -ge 60 ] && rm -f ${1}/${i} && break
a=$((a+1))
done
else
elif [ "${RECORDING_LENGTH}" -lt 10 ];then
until [ "$(ffmpeg -i ${1}/${i} 2>&1 | awk -F. '/Duration/ {print $1}' | cut -d':' -f3-4)" == "00:0${RECORDING_LENGTH}" ];do
sleep 1
[ $a -ge ${RECORDING_LENGTH} ] && rm -f ${1}/${i} && break
a=$((a+1))
done
else
until [ "$(ffmpeg -i ${1}/${i} 2>&1 | awk -F. '/Duration/ {print $1}' | cut -d':' -f3-4)" == "00:${RECORDING_LENGTH}" ];do
sleep 1
[ $a -ge ${RECORDING_LENGTH} ] && sudo rm -f ${1}/${i} && break
[ $a -ge ${RECORDING_LENGTH} ] && rm -f ${1}/${i} && break
a=$((a+1))
done
fi
if [ -f ${1}/${i} ] && [ ! -f ${CUSTOM_LIST} ] && [ -z $BIRDWEATHER_ID ];then
if [ -f ${1}/${i} ] && [ ! -f ${INCLUDE_LIST} ] && [ ! -f ${EXCLUDE_LIST} ] && [ -z $BIRDWEATHER_ID ];then
echo "python3 analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
@@ -120,9 +140,9 @@ run_analysis() {
--lon "${LONGITUDE}" \
--week "${WEEK}" \
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}"
elif [ -f ${1}/${i} ] && [ -f ${CUSTOM_LIST} ] && [ -z $BIRDWEATHER_ID ];then
elif [ -f ${1}/${i} ] && [ -f ${INCLUDELIST} ] && [ ! -f ${EXCLUDE_LIST} ] && [ -z $BIRDWEATHER_ID ];then
echo "python3 analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
@@ -132,7 +152,7 @@ run_analysis() {
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--custom_list "${CUSTOM_LIST}""
--include_list "${INCLUDE_LIST}""
"${VENV}"/bin/python analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
@@ -140,10 +160,10 @@ run_analysis() {
--lon "${LONGITUDE}" \
--week "${WEEK}" \
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--custom_list "${CUSTOM_LIST}"
elif [ -f ${1}/${i} ] && [ ! -f ${CUSTOM_LIST} ] && [ ! -z $BIRDWEATHER_ID ];then
--include_list "${INCLUDE_LIST}"
elif [ -f ${1}/${i} ] && [ ! -f ${INCLUDE_LIST} ] && [ -f ${EXCLUDE_LIST} ] && [ -z $BIRDWEATHER_ID ];then
echo "python3 analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
@@ -153,7 +173,7 @@ run_analysis() {
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--birdweather_id IN_USE"
--exclude_list "${EXCLUDE_LIST}""
"${VENV}"/bin/python analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
@@ -161,10 +181,10 @@ run_analysis() {
--lon "${LONGITUDE}" \
--week "${WEEK}" \
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--birdweather_id "${BIRDWEATHER_ID}"
elif [ -f ${1}/${i} ] && [ -f ${CUSTOM_LIST} ] && [ ! -z $BIRDWEATHER_ID ];then
--exclude_list "${EXCLUDE_LIST}"
elif [ -f ${1}/${i} ] && [ -f ${INCLUDE_LIST} ] && [ -f ${EXCLUDE_LIST} ] && [ -z $BIRDWEATHER_ID ];then
echo "python3 analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
@@ -174,8 +194,8 @@ run_analysis() {
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--custom_list "${CUSTOM_LIST}" \
--birdweather_id IN_USE"
--include_list "${INCLUDE_LIST}" \
--exclude_list "${EXCLUDE_LIST}""
"${VENV}"/bin/python analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
@@ -183,9 +203,101 @@ run_analysis() {
--lon "${LONGITUDE}" \
--week "${WEEK}" \
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--custom_list "${CUSTOM_LIST}" \
--include_list "${INCLUDE_LIST}" \
--exclude_list "${EXCLUDE_LIST}"
elif [ -f ${1}/${i} ] && [ ! -f ${INCLUDE_LIST} ] && [ ! -f ${EXCLUDE_LIST} ] && [ ! -z $BIRDWEATHER_ID ];then
echo "python3 analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
--lat "${LATITUDE}" \
--lon "${LONGITUDE}" \
--week "${WEEK}" \
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--birdweather_id "IN_USE""
"${VENV}"/bin/python analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
--lat "${LATITUDE}" \
--lon "${LONGITUDE}" \
--week "${WEEK}" \
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--birdweather_id "${BIRDWEATHER_ID}"
elif [ -f ${1}/${i} ] && [ -f ${INCLUDE_LIST} ] && [ ! -f ${EXCLUDE_LIST} ] && [ ! -z $BIRDWEATHER_ID ];then
echo "python3 analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
--lat "${LATITUDE}" \
--lon "${LONGITUDE}" \
--week "${WEEK}" \
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--include_list "${INCLUDE_LIST}" \
--birdweather_id "IN_USE""
"${VENV}"/bin/python analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
--lat "${LATITUDE}" \
--lon "${LONGITUDE}" \
--week "${WEEK}" \
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--include_list "${INCLUDE_LIST}" \
--birdweather_id "${BIRDWEATHER_ID}"
elif [ -f ${1}/${i} ] && [ ! -f ${INCLUDE_LIST} ] && [ -f ${EXCLUDE_LIST} ] && [ ! -z $BIRDWEATHER_ID ];then
echo "python3 analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
--lat "${LATITUDE}" \
--lon "${LONGITUDE}" \
--week "${WEEK}" \
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--exclude_list "${EXCLUDE_LIST}" \
--birdweather_id "IN_USE""
"${VENV}"/bin/python analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
--lat "${LATITUDE}" \
--lon "${LONGITUDE}" \
--week "${WEEK}" \
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--exclude_list "${EXCLUDE_LIST}" \
--birdweather_id "${BIRDWEATHER_ID}"
elif [ -f ${1}/${i} ] && [ -f ${INCLUDE_LIST} ] && [ -f ${EXCLUDE_LIST} ] && [ ! -z $BIRDWEATHER_ID ];then
echo "python3 analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
--lat "${LATITUDE}" \
--lon "${LONGITUDE}" \
--week "${WEEK}" \
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--include_list "${INCLUDE_LIST}" \
--exclude_list "${EXCLUDE_LIST}" \
--birdweather_id "IN_USE""
"${VENV}"/bin/python analyze.py \
--i "${1}/${i}" \
--o "${1}/${i}.csv" \
--lat "${LATITUDE}" \
--lon "${LONGITUDE}" \
--week "${WEEK}" \
--overlap "${OVERLAP}" \
--sensitivity "${SENSITIVITY}" \
--min_conf "${CONFIDENCE}" \
--include_list "${INCLUDE_LIST}" \
--exclude_list "${EXCLUDE_LIST}" \
--birdweather_id "${BIRDWEATHER_ID}"
fi
done
scripts/birdweather_request.php
+15
View File
@@ -0,0 +1,15 @@
<?php
if (file_exists('/home/pi/BirdNET-Pi/thisrun.txt')) {
$config = parse_ini_file('/home/pi/BirdNET-Pi/thisrun.txt');
} elseif (file_exists('/home/pi/BirdNET-Pi/firstrun.ini')) {
$config = parse_ini_file('/home/pi/BirdNET-Pi/firstrun.ini');
}
$template = file_get_contents("email_template");
foreach($config as $key => $value)
{
$template = str_replace('{{ '.$key.' }}', $value, $template);
}
echo $template;
?>
scripts/clear_all_data.sh
+37 -22
View File
@@ -13,7 +13,7 @@ echo "Removing all data . . . "
sudo rm -drf "${RECS_DIR}"
sudo rm -f "${IDFILE}"
sudo rm -f $(dirname ${my_dir})/BirdDB.txt
echo "Recreating necessary directories"
echo "Creating necessary directories"
[ -d ${EXTRACTED} ] || sudo -u ${USER} mkdir -p ${EXTRACTED}
[ -d ${EXTRACTED}/By_Date ] || sudo -u ${USER} mkdir -p ${EXTRACTED}/By_Date
[ -d ${EXTRACTED}/By_Common_Name ] || sudo -u ${USER} mkdir -p ${EXTRACTED}/By_Common_Name
@@ -24,50 +24,65 @@ echo "Recreating necessary directories"
sudo -u ${USER} ln -fs $(dirname ${my_dir})/homepage/* ${EXTRACTED}
if [ ! -z ${BIRDNETLOG_URL} ];then
BIRDNETLOG_URL="$(echo ${BIRDNETLOG_URL} | sed 's/\/\//\\\/\\\//g')"
sudo -u ${USER} sed -i "s/http:\/\/birdnetpi.local:8080/"${BIRDNETLOG_URL}"/g" $(dirname ${my_dir})/homepage/*.html
phpfiles="$(grep -l "birdnetpi.local:8080" ${my_dir}/*.php)"
sudo -u${USER} sed -i "s/http:\/\/$(hostname).local:8080/"${BIRDNETLOG_URL}"/g" $(dirname ${my_dir})/homepage/*.html
phpfiles="$(grep -l "$(hostname).local:8080" ${my_dir}/*.php)"
for i in "${phpfiles[@]}";do
sudo -u ${USER} sed -i "s/http:\/\/birdnetpi.local:8080/"${BIRDNETLOG_URL}"/g" ${i}
sudo -u${USER} sed -i "s/http:\/\/$(hostname).local:8080/"${BIRDNETLOG_URL}"/g" ${i}
done
fi
if [ ! -z ${EXTRACTIONLOG_URL} ];then
EXTRACTIONLOG_URL="$(echo ${EXTRACTIONLOG_URL} | sed 's/\/\//\\\/\\\//g')"
sudo -u ${USER} sed -i "s/http:\/\/birdnetpi.local:8888/"${EXTRACTIONLOG_URL}"/g" $(dirname ${my_dir})/homepage/*.html
phpfiles="$(grep -l "birdnetpi.local:8888" ${my_dir}/*.php)"
if [ ! -z ${WEBTERMINAL_URL} ];then
WEBTERMINAL_URL="$(echo ${WEBTERMINAL_URL} | sed 's/\/\//\\\/\\\//g')"
sudo -u${USER} sed -i "s/http:\/\/$(hostname).local:8888/"${WEBTERMINAL_URL}"/g" $(dirname ${my_dir})/homepage/*.html
phpfiles="$(grep -l "$(hostname).local:8888" ${my_dir}/*.php)"
for i in "${phpfiles[@]}";do
sudo -u ${USER} sed -i "s/http:\/\/birdnetpi.local:8888/"${EXTRACTIONLOG_URL}"/g" ${i}
sudo -u${USER} sed -i "s/http:\/\/$(hostname).local:8888/"${WEBTERMINAL_URL}"/g" ${i}
done
fi
sudo -u ${USER} ln -fs $(dirname ${my_dir})/model/labels.txt ${my_dir}/
sudo -u ${USER} ln -fs $(dirname ${my_dir})/scripts ${EXTRACTED}
if [ ! -z ${BIRDNETPI_URL} ];then
if [ -z ${BIRDNETPI_URL} ];then
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/homepage/*.html
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/scripts/*.php
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/scripts/*/*.php
else
BIRDNETPI_URL="$(echo ${BIRDNETPI_URL} | sed 's/\/\//\\\/\\\//g')"
sudo -u ${USER} sed -i "s/http:\/\/birdnetpi.local/"${BIRDNETPI_URL}"/g" $(dirname ${my_dir})/homepage/*.html
phpfiles="$(grep -l birdnetpi.local ${my_dir}/*.php)"
for i in "${phpfiles[@]}";do
sudo -u ${USER} sed -i "s/http:\/\/birdnetpi.local/"${BIRDNETPI_URL}"/g" ${i}
done
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/homepage/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/scripts/*.php
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/scripts/*/*.php
fi
sudo -u ${USER} ln -fs $(dirname ${my_dir})/scripts/spectrogram.php ${EXTRACTED}
sudo -u ${USER} ln -fs $(dirname ${my_dir})/scripts/overview.php ${EXTRACTED}
sudo -u ${USER} ln -fs $(dirname ${my_dir})/scripts/viewday.php ${EXTRACTED}
sudo -u ${USER} ln -fs $(dirname ${my_dir})/scripts/overview.php ${EXTRACTED}
sudo -u ${USER} ln -fs $(dirname ${my_dir})/scripts/viewdb.php ${EXTRACTED}
sudo -u ${USER} ln -fs $(dirname ${my_dir})/homepage/images/favicon.ico ${EXTRACTED}
sudo -u ${USER} ln -fs ${HOME}/phpsysinfo ${EXTRACTED}
sudo -u ${USER} cp -f $(dirname ${my_dir})/templates/phpsysinfo.ini ${HOME}/phpsysinfo/
sudo -u ${USER} cp -f $(dirname ${my_dir})/templates/green_bootstrap.css ${HOME}/phpsysinfo/templates/
sudo -u ${USER} cp -f $(dirname ${my_dir})/templates/index_bootstrap.html ${HOME}/phpsysinfo/templates/html
echo "Setting Wttr.in URL to "${LATITUDE}", "${LONGITUDE}""
sudo -u ${USER} git -C $(dirname ${my_dir}) checkout -f homepage/menu.html
sudo -u ${USER} sed -i "s/https:\/\/v2.wttr.in\//https:\/\/v2.wttr.in\/"${LATITUDE},${LONGITUDE}"/g" $(dirname ${my_dir})/homepage/menu.html
sudo -u${USER} sed -i "s/https:\/\/v2.wttr.in\//https:\/\/v2.wttr.in\/"${LATITUDE},${LONGITUDE}"/g" $(dirname ${my_dir})/homepage/menu.html
chmod -R g+rw $(dirname ${my_dir})
chmod -R g+rw ${RECS_DIR}
echo "Generating BirdDB.txt"
[ -f $(dirname ${my_dir})/BirdDB.txt ] || sudo -u ${USER} touch $(dirname ${my_dir})/BirdDB.txt
echo "Date;Time;Sci_Name;Com_Name;Confidence;Lat;Lon;Cutoff;Week;Sens;Overlap" | sudo -u ${BIRDNET_USER} tee -a $(dirname ${my_dir})/BirdDB.txt
if ! [ -f $(dirname ${my_dir})/BirdDB.txt ];then
sudo -u ${USER} touch $(dirname ${my_dir})/BirdDB.txt
echo "Date;Time;Sci_Name;Com_Name;Confidence;Lat;Lon;Cutoff;Week;Sens;Overlap" | sudo -u ${USER} tee -a $(dirname ${my_dir})/BirdDB.txt
elif ! grep Date $(dirname ${my_dir})/BirdDB.txt;then
sudo -u ${USER} sed -i '1 i\Date;Time;Sci_Name;Com_Name;Confidence;Lat;Lon;Cutoff;Week;Sens;Overlap' $(dirname ${my_dir})/BirdDB.txt
fi
ln -sf $(dirname ${my_dir})/BirdDB.txt ${my_dir}/BirdDB.txt &&
chown pi:pi ${my_dir}/BirdDB.txt && chmod g+rw ${my_dir}/BirdDB.txt
sudo -u ${BIRDNET_USER} cp -f ${HOME}/BirdNET-Pi/homepage/index.html ${EXTRACTED}/
echo "Dropping and re-creating database"
sudo /home/pi/BirdNET-Pi/scripts/createdb_bullseye.sh
echo "Restarting services"
sudo systemctl restart birdnet_recording.service
sudo systemctl start birdnet_recording.service
scripts/config.php
+43 -19
View File
@@ -1,5 +1,22 @@
<?php
session_start();
error_reporting(E_ALL);
ini_set('display_errors',1);
?>
<meta name="viewport" content="width=device-width, initial-scale=1">
<style>
/* Chrome, Safari, Edge, Opera */
input::-webkit-outer-spin-button,
input::-webkit-inner-spin-button {
-webkit-appearance: none;
margin: 0;
}
/* Firefox */
input[type=number] {
-moz-appearance: textfield;
}
* {
font-family: 'Arial', 'Gill Sans', 'Gill Sans MT',
' Calibri', 'Trebuchet MS', 'sans-serif';
@@ -31,12 +48,9 @@ a {
}
.block {
display: block;
font-weight: bold;
width:100%;
width:50%;
border: none;
background-color: #04AA6D;
padding: 20px 20px;
color: white;
padding: 10px 10px;
font-size: medium;
cursor: pointer;
text-align: center;
@@ -55,6 +69,7 @@ form {
text-align:left;
margin-left:20px;
}
h2 {
margin-bottom:0px;
}
@@ -73,6 +88,9 @@ input {
font-size:large;
}
@media screen and (max-width: 800px) {
select {
width:100%;
}
h2 {
margin-bottom:0px;
text-align:center;
@@ -82,9 +100,12 @@ input {
margin-left:0px;
}
.column {
float: none;
width: 100%;
}
float: none;
width: 100%;
}
input, label {
width:100%;
{
}
</style>
</head>
@@ -92,7 +113,7 @@ input {
<body style="background-color: rgb(119, 196, 135);">
<div class="row">
<div class="column first">
<form action="write_config.php" method="POST">
<form action="write_config.php" method="POST" name="normal">
<?php
if (file_exists('/home/pi/BirdNET-Pi/thisrun.txt')) {
$config = parse_ini_file('/home/pi/BirdNET-Pi/thisrun.txt');
@@ -100,16 +121,17 @@ if (file_exists('/home/pi/BirdNET-Pi/thisrun.txt')) {
$config = parse_ini_file('/home/pi/BirdNET-Pi/firstrun.ini');
} ?>
<label for="latitude">Latitude: </label>
<input name="latitude" type="text" value="<?php print($config['LATITUDE']);?>" required/><br>
<input name="latitude" type="number" max="90" min="-90" step="0.0001" value="<?php print($config['LATITUDE']);?>" required/><br>
<label for="longitude">Longitude: </label>
<input name="longitude" type="text" value="<?php print($config['LONGITUDE']);?>" required/><br>
<input name="longitude" type="number" max="180" min="-180" step="0.0001" value="<?php print($config['LONGITUDE']);?>" required/><br>
<label for="birdweather_id">BirdWeather ID: </label>
<input name="birdweather_id" type="text" value="<?php print($config['BIRDWEATHER_ID']);?>" /><br>
<p><a href="mailto:tim@birdweather.com?subject=Request%20BirdWeather%20ID&body=<?php include('birdweather_request.php'); ?>" target="top">Email Tim</a> to request a BirdWeather ID</p>
<label for="pushed_app_key">Pushed App Key: </label>
<input name="pushed_app_key" type="text" value="<?php print($config['PUSHED_APP_KEY']);?>" /><br>
<label for="pushed_app_secret">Pushed App Secret: </label>
<input name="pushed_app_secret" type="text" value="<?php print($config['PUSHED_APP_SECRET']);?>" /><br>
<label for"language">Database Language: </label>
<label for="language">Database Language: </label>
<select name="language">
<option value="none">Select your language</option>
<option value="labels_af.txt">Afrikaans</option>
@@ -143,20 +165,22 @@ if (file_exists('/home/pi/BirdNET-Pi/thisrun.txt')) {
<option value="labels_uk.txt">Ukrainian</option>
</select>
<br><br>
<input type="submit" value="<?php
@session_start();
<button type="submit" name="normal" class="block"><?php
if(isset($_SESSION['success'])){
echo "Success!";
unset($_SESSION['success']);
} else {
echo "Update Settings";
}
?>">
<br>
<br>
<button type="text"><a href="advanced.php">Advanced Settings</a></button>
?></button>
</form>
<form action="advanced.php" class="form2">
<button type="submit" class="block">Advanced Settings</button>
</form>
<form action="index.html" class="form2">
<button type="submit" class="block">Tools</button>
</form>
</div>
</div>
</body>
scripts/createdb_bullseye.sh
+1 -1
View File
@@ -39,7 +39,7 @@ GRANT ALL ON birds.* TO 'birder'@'localhost' IDENTIFIED BY '${DB_PWD}' WITH GRAN
FLUSH PRIVILEGES;
exit
EOF
sudo -u${USER} sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/analyze.py
sudo -u${USER} sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/scripts/server.py
sed -i "s/mysqli.default_host =.*/mysqli.default_host = localhost/g" /etc/php/7.4/fpm/php.ini
sed -i "s/mysqli.default_user =.*/mysqli.default_user = birder/g" /etc/php/7.4/fpm/php.ini
sed -i "s/mysqli.default_pw =.*/mysqli.default_pw = ${DB_PWD}/g" /etc/php/7.4/fpm/php.ini
scripts/createdb_buster.sh
-46
View File
@@ -1,46 +0,0 @@
#!/usr/bin/env bash
# This script performs the mysql_secure_installation
# Creates the birds database
# Creates the detections table
# Creates the birder user and grants them appropriate
# permissions
# If using this script to re-initialize (DROP then CREATE)
# the DB, be sure to run this as root or with sudo
source /etc/birdnet/birdnet.conf
DB_ROOT_PWD=staggerwontonpurporting
mysql_secure_installation << EOF
y
${DB_ROOT_PWD}
${DB_ROOT_PWD}
y
y
y
EOF
mysql << EOF
DROP DATABASE IF EXISTS birds;
CREATE DATABASE IF NOT EXISTS birds;
USE birds;
CREATE TABLE IF NOT EXISTS detections (
Date DATE,
Time TIME,
Sci_Name VARCHAR(100) NOT NULL,
Com_Name VARCHAR(100) NOT NULL,
Confidence FLOAT,
Lat FLOAT,
Lon FLOAT,
Cutoff FLOAT,
Week INT,
Sens FLOAT,
Overlap FLOAT);
GRANT ALL ON birds.* TO 'birder'@'localhost' IDENTIFIED BY '${DB_PWD}' WITH GRANT OPTION;
FLUSH PRIVILEGES;
exit
EOF
sudo -u${USER} sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/analyze.py
sudo -u${USER} sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/scripts/viewdb.php
sudo -u${USER} sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/scripts/viewday.php
sudo -u${USER} sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/scripts/overview.php
scripts/daily_plot.py
+81 -67
View File
@@ -1,4 +1,9 @@
#!/home/pi/BirdNET-Pi/birdnet/bin/python3
import mysql.connector as sql
import os
import configparser
import pandas as pd
import seaborn as sns
# import numpy as np
@@ -7,82 +12,75 @@ from matplotlib.colors import LogNorm
from datetime import datetime
import textwrap
#Extract DB_PWD from thisrun.txt
with open('/home/pi/BirdNET-Pi/thisrun.txt', 'r') as f:
this_run = f.readlines()
db_pwd = str(str(str([i for i in this_run if i.startswith('DB_PWD')]).split('=')[1]).split('\\')[0])
#Read database into Pandas dataframe
df = pd.read_csv('~/BirdNET-Pi/BirdDB.txt', sep=';')
db_connection = sql.connect(host='localhost',
database='birds',
user='birder',
password=db_pwd)
db_cursor=db_connection.cursor(dictionary=True)
db_cursor.execute('SELECT * FROM detections')
table_rows = db_cursor.fetchall()
df=pd.DataFrame(table_rows)
#Convert Date and Time Fields to Panda's format
df['Date']=pd.to_datetime(df['Date'])
df['Time']=pd.to_datetime(df['Time'])
df['Time']=pd.to_datetime(df['Time'], unit='ns')
#Add round hours to dataframe
df['Hour of Day'] = [r.hour for r in df.Time]
#Create separate dataframes for separate locations
df_jhb=df[df.Lat > -32]
df_ec = df[df.Lat < -32]
df_plt=df #Default to use the whole Dbase
#Get todays readings for Joburg
#Get todays readings
now = datetime.now()
df_jhb_today = df_jhb[df_jhb['Date']==now.strftime("%Y-%m-%d")]
df_plt_today = df_plt[df_plt['Date']==now.strftime("%Y-%m-%d")]
# Definition to start getting top N detections - work in process
def filter_by_freq(df: pd.DataFrame, column: str, min_freq: int) -> pd.DataFrame:
"""Filters the DataFrame based on the value frequency in the specified column.
#Set number of species to report
readings=10
:param df: DataFrame to be filtered.
:param column: Column name that should be frequency filtered.
:param min_freq: Minimal value frequency for the row to be accepted.
:return: Frequency filtered DataFrame.
"""
# Frequencies of each value in the column.
freq = df[column].value_counts()
# Select frequent values. Value is in the index.
frequent_values = freq[freq >= min_freq].index
# Return only rows with value frequency above threshold.
return df[df[column].isin(frequent_values)]
#Get top readings today
min_valuecounts = 2
jhb_gt_min = filter_by_freq (df_jhb_today,'Com_Name', min_valuecounts)
jhb_gt_min_counts = jhb_gt_min['Com_Name'].value_counts()
print(jhb_gt_min_counts)
jhb_top10_today = (df_jhb_today['Com_Name'].value_counts()[:10])
df_jhb_top10_today = df_jhb_today[df_jhb_today.Com_Name.isin(jhb_top10_today.index)]
#Get bottom 10 today
jhb_bot10_today=(df_jhb_today['Com_Name'].value_counts()[-10:])
df_jhb_bot10_today = df_jhb_today[df_jhb_today.Com_Name.isin(jhb_bot10_today.index)]
plt_top10_today = (df_plt_today['Com_Name'].value_counts()[:readings])
df_plt_top10_today = df_plt_today[df_plt_today.Com_Name.isin(plt_top10_today.index)]
#Set Palette for graphics
pal = "Greens"
#Set up plot axes and titles
f, axs = plt.subplots(1, 2, figsize = (10, 4), gridspec_kw=dict(width_ratios=[3, 5]))
plt.subplots_adjust(left=None, bottom=None, right=None, top=None, wspace=0, hspace=None)
f, axs = plt.subplots(1, 3, figsize = (10, 4), gridspec_kw=dict(width_ratios=[3, 2, 5]))
plt.subplots_adjust(left=None, bottom=None, right=None, top=None, wspace=0, hspace=0)
#Generate frequency plot
plot=sns.countplot(y='Com_Name', data = df_jhb_top10_today, palette = pal+"_r", order=pd.value_counts(df_jhb_top10_today['Com_Name']).iloc[:20].index, ax=axs[0])
plot=sns.countplot(y='Com_Name', data = df_plt_top10_today, palette = pal+"_r", order=pd.value_counts(df_plt_top10_today['Com_Name']).iloc[:readings].index, ax=axs[0])
#Try plot grid lines between bars - problem at the moment plots grid lines on bars - want between bars
# plot.grid(True, axis='y')
plot.set_yticklabels(['\n'.join(textwrap.wrap(ticklabel.get_text(),15)) for ticklabel in plot.get_yticklabels()])
z=plot.get_ymajorticklabels()
plot.set_yticklabels(['\n'.join(textwrap.wrap(ticklabel.get_text(),15)) for ticklabel in plot.get_yticklabels()], fontsize = 10)
plot.set(ylabel=None)
plot.set(xlabel="Detections")
huw=df_plt_top10_today.groupby('Com_Name')['Confidence'].mean()
plot = sns.boxenplot(x=df_plt_top10_today['Confidence']*100,color='Green', y=df_plt_top10_today['Com_Name'], ax=axs[1],order=pd.value_counts(df_plt_top10_today['Com_Name']).iloc[:readings].index)
plot.set(xlabel="Confidence", ylabel=None,yticklabels=[])
#Generate crosstab matrix for heatmap plot
heat = pd.crosstab(df_jhb_top10_today['Com_Name'],df_jhb_top10_today['Hour of Day'])
heat = pd.crosstab(df_plt_top10_today['Com_Name'],df_plt_top10_today['Hour of Day'])
#Order heatmap Birds by frequency of occurrance
heat.index = pd.CategoricalIndex(heat.index, categories = pd.value_counts(df_jhb_top10_today['Com_Name']).iloc[:10].index)
heat.index = pd.CategoricalIndex(heat.index, categories = pd.value_counts(df_plt_top10_today['Com_Name']).iloc[:readings].index)
heat.sort_index(level=0, inplace=True)
@@ -91,7 +89,7 @@ heat_frame = pd.DataFrame(data=0, index=heat.index, columns = hours_in_day)
heat=(heat+heat_frame).fillna(0)
#Generatie heatmap plot
plot = sns.heatmap(heat, norm=LogNorm(), annot=True, fmt="g", annot_kws={"fontsize":7}, cmap = pal , square = False, cbar=False, linewidths = 0.5, linecolor = "Grey", ax=axs[1], yticklabels = False)
plot = sns.heatmap(heat, norm=LogNorm(), annot=True, annot_kws={"fontsize":7}, cmap = pal , square = False, cbar=False, linewidths = 0.5, linecolor = "Grey", ax=axs[2], yticklabels = False)
# Set heatmap border
for _, spine in plot.spines.items():
@@ -100,55 +98,71 @@ for _, spine in plot.spines.items():
plot.set(ylabel=None)
plot.set(xlabel="Hour of Day")
#Set combined plot layout and titles
plt.tight_layout()
# plt.tight_layout()
f.subplots_adjust(top=0.9)
plt.suptitle("Last Updated: "+ str(now.strftime("%B, %d at %T")))
plt.suptitle("Last Updated: "+ str(now.strftime("%d %m %Y %H:%M")))
#Save combined plot
savename='/home/pi/BirdSongs/Extracted/Charts/Combo-'+str(now.strftime("%d-%m-%Y"))+'.png'
plt.savefig(savename)
# plt.show()
plt.close()
#Get bottom 10 today
jhb_bot10_today=(df_jhb_today['Com_Name'].value_counts()[-10:])
df_jhb_bot10_today = df_jhb_today[df_jhb_today.Com_Name.isin(jhb_bot10_today.index)]
plt_bot10_today = (df_plt_today['Com_Name'].value_counts()[-readings:])
df_plt_bot10_today = df_plt_today[df_plt_today.Com_Name.isin(plt_bot10_today.index)]
#Set Palette for graphics
pal = "Reds"
#Set up plot axes and titles
f, axs = plt.subplots(1, 2, figsize = (8, 4), gridspec_kw=dict(width_ratios=[3, 5]))
f, axs = plt.subplots(1, 3, figsize = (10, 4), gridspec_kw=dict(width_ratios=[3, 2, 5]))
plt.subplots_adjust(left=None, bottom=None, right=None, top=None, wspace=0, hspace=0)
#Generate frequency plot
plot=sns.countplot(y='Com_Name', data = df_jhb_bot10_today, palette = pal+"_r", order=pd.value_counts(df_jhb_bot10_today['Com_Name']).iloc[:10].index, ax=axs[0])
plot.set_yticklabels(['\n'.join(textwrap.wrap(ticklabel.get_text(),17)) for ticklabel in plot.get_yticklabels()])
plot.set(ylabel=None)
plot.set(xlabel="no. of detections")
#Generate crosstab matrix for heatmap plot
heat = pd.crosstab(df_jhb_bot10_today['Com_Name'],df_jhb_bot10_today['Hour of Day'])
plot=sns.countplot(y='Com_Name', data = df_plt_bot10_today, palette = pal+"_r", order=pd.value_counts(df_plt_bot10_today['Com_Name']).iloc[-readings:].index, ax=axs[0])
#Try plot grid lines between bars - problem at the moment plots grid lines on bars - want between bars
# plot.grid(True, axis='y')
z=plot.get_ymajorticklabels()
plot.set_yticklabels(['\n'.join(textwrap.wrap(ticklabel.get_text(),15)) for ticklabel in plot.get_yticklabels()], fontsize = 10)
plot.set(ylabel=None)
plot.set(xlabel="Detections")
huw=df_plt_bot10_today.groupby('Com_Name')['Confidence'].mean()
plot = sns.boxenplot(x=df_plt_bot10_today['Confidence']*100,color='Red', y=df_plt_bot10_today['Com_Name'], ax=axs[1],order=pd.value_counts(df_plt_bot10_today['Com_Name']).iloc[-readings:].index)
plot.set(xlabel="Confidence", ylabel=None,yticklabels=[])
#Generate crosstab matrix for heatmap plot
heat = pd.crosstab(df_plt_bot10_today['Com_Name'],df_plt_bot10_today['Hour of Day'])
#Order heatmap Birds by frequency of occurrance
heat.index = pd.CategoricalIndex(heat.index, categories = pd.value_counts(df_jhb_bot10_today['Com_Name']).iloc[:10].index)
heat.index = pd.CategoricalIndex(heat.index, categories = pd.value_counts(df_plt_bot10_today['Com_Name']).iloc[-readings:].index)
heat.sort_index(level=0, inplace=True)
hours_in_day = pd.Series(data = range(0,24))
heat_frame = pd.DataFrame(data=0, index=heat.index, columns = hours_in_day)
heat=(heat+heat_frame).fillna(0)
#Generate heatmap plot
plot = sns.heatmap(heat, norm=LogNorm(), annot=True, annot_kws={"fontsize":7}, cmap = pal , square = False, cbar=False, linewidths = 0.5, linecolor = "Grey", ax=axs[1], yticklabels = False)
#Generatie heatmap plot
plot = sns.heatmap(heat, norm=LogNorm(), annot=True, annot_kws={"fontsize":7}, cmap = pal , square = False, cbar=False, linewidths = 0.5, linecolor = "Grey", ax=axs[2], yticklabels = False)
# Set heatmap border
for _, spine in plot.spines.items():
spine.set_visible(True)
plot.set(ylabel=None)
#Set combined plot layout and titles
plt.tight_layout()
f.subplots_adjust(top=0.9)
plt.suptitle("Bottom 10 Detected: "+ str(now.strftime("%d-%h-%Y %H:%M")))
plot.set(ylabel=None)
plot.set(xlabel="Hour of Day")
#Set combined plot layout and titles
# plt.tight_layout()
f.subplots_adjust(top=0.9)
plt.suptitle("Last Updated: "+ str(now.strftime("%d %m %Y %H:%M")))
#Save combined plot
savename='/home/pi/BirdSongs/Extracted/Charts/Combo2-'+str(now.strftime("%d-%m-%Y"))+'.png'
plt.savefig(savename)
#plt.show()
plt.close()
scripts/del_from_exclude.php
+22
View File
@@ -0,0 +1,22 @@
<?php
error_reporting(E_ALL);
ini_set('display_errors',1);
$file='/home/pi/BirdNET-Pi/exclude_species_list.txt';
$str=file_get_contents("$file");
$str = preg_replace('/^\h*\v+/m', '', $str);
file_put_contents("$file", "$str");
if (isset($_POST['species']))
foreach($_POST['species'] as $selectedOption) {
$content = file_get_contents("/home/pi/BirdNET-Pi/exclude_species_list.txt");
$newcontent = str_replace($selectedOption, "", "$content");
file_put_contents("/home/pi/BirdNET-Pi/exclude_species_list.txt", "$newcontent");
}
$file='/home/pi/BirdNET-Pi/exclude_species_list.txt';
$str=file_get_contents("$file");
//$str = preg_replace("/(^[\r\n]*|[\r\n]+)[\s\t]*[\r\n]+/", "\n", $str);
$str = preg_replace('/^\h*\v+/m', '', $str);
file_put_contents("$file", "$str");
header("Location: {$_SERVER['HTTP_REFERER']}");
exit;
?>
scripts/del_from_include.php
+22
View File
@@ -0,0 +1,22 @@
<?php
error_reporting(E_ALL);
ini_set('display_errors',1);
$file='/home/pi/BirdNET-Pi/include_species_list.txt';
$str=file_get_contents("$file");
$str = preg_replace('/^\h*\v+/m', '', $str);
file_put_contents("$file", "$str");
if (isset($_POST['species']))
foreach($_POST['species'] as $selectedOption) {
$content = file_get_contents("/home/pi/BirdNET-Pi/include_species_list.txt");
$newcontent = str_replace($selectedOption, "", "$content");
file_put_contents("/home/pi/BirdNET-Pi/include_species_list.txt", "$newcontent");
}
$file='/home/pi/BirdNET-Pi/include_species_list.txt';
$str=file_get_contents("$file");
//$str = preg_replace("/(^[\r\n]*|[\r\n]+)[\s\t]*[\r\n]+/", "\n", $str);
$str = preg_replace('/^\h*\v+/m', '', $str);
file_put_contents("$file", "$str");
header("Location: {$_SERVER['HTTP_REFERER']}");
exit;
?>
scripts/disk_check.sh
+11 -2
View File
@@ -6,10 +6,19 @@ if [ "${used//%}" -ge 95 ]; then
source /etc/birdnet/birdnet.conf
case $FULL_DISK in
0) echo "Removing oldest data"
purge) echo "Removing oldest data"
rm -drfv "$(find ${EXTRACTED}/By_Date/* -maxdepth 1 -type d -prune \
| sort -r | tail -n1)";;
*) echo "Stopping Core Services"
keep) echo "Stopping Core Services"
/usr/local/bin/stop_core_services.sh;;
esac
fi
sleep 1
if [ "${used//%}" -ge 95 ]; then
case $FULL_DISK in
purge) echo "Removing more data"
rm -rfv ${PROCESSED}/*;;
keep) echo "Stopping Core Services"
/usr/local/bin/stop_core_services.sh;;
esac
fi
scripts/email_template
+13
View File
@@ -0,0 +1,13 @@
Hi, Tim, and thank you so much for BirdWeather.com!
%0A%0A
Below is the information I would like to use to request a BirdWeather ID
%0A%0A
Latitude={{ LATITUDE }}%0A
Longitude={{ LONGITUDE }}%0A
Location= [ Create a location name ]%0A
%0A%0A
Thank you so much!%0A
[ Your Name Here ]
%0A%0A
Disclaimer: By requesting this BirdWeather ID, I acknowledge that my location%0A
and recording data will be made public.
scripts/exclude_list.php
+121
View File
@@ -0,0 +1,121 @@
<meta name="viewport" content="width=device-width, initial-scale=1">
<style>
* {
font-family: 'Arial', 'Gill Sans', 'Gill Sans MT',
' Calibri', 'Trebuchet MS', 'sans-serif';
box-sizing: border-box;
box-sizing: border-box;
}
/* Create two unequal columns that floats next to each other */
.column {
float: left;
padding: 10px;
}
.first {
width: 45%;
}
.second {
width: 10%;
display: flex;
justify-content: center;
flex-direction: column;
height: 100%;
}
.third {
width: 45%;
}
/* Clear floats after the columns */
.row:after {
content: "";
display: table;
clear: both;
}
body {
background-color: rgb(119, 196, 135);
}
a {
text-decoration: none;
color: white;
}
.block {
display: block;
font-weight: bold;
width:100%;
border: none;
background-color: #04AA6D;
padding: 20px 20px;
color: white;
font-size: medium;
cursor: pointer;
text-align: center;
}
h2 {
text-align: center;
}
select {
width:100%
}
@media screen and (max-width: 800px) {
.column {
float: none;
width: 100%;
}
}
</style>
<?php
//remove <script></script> and add php start and close tag
//comment these two lines when code started working fine
error_reporting(E_ALL);
ini_set('display_errors',1);
$filename = 'labels.txt';
$eachlines = file($filename, FILE_IGNORE_NEW_LINES);
?>
<body style="background-color: rgb(119, 196, 135);">
<div class="row">
<div class="column first">
<h2>All Species Labels</h2>
<form action="add_to_exclude.php" method="POST" id="add">
<select name="species[]" id="species" multiple size="30">
<option selected value="base">Please Select</option>
<?php
foreach($eachlines as $lines){
echo "<option value='".$lines."'>$lines</option>";
}?>
</select>
</form>
</div>
<div class="column second">
<button type="submit" form="add" class="block">Add to list</button><br>
<button type="submit" form="del" class="block">Remove from list</button>
</div>
<div class="column third">
<h2>Excluded Species List</h2>
<form action="del_from_exclude.php" method="POST" id="del">
<select name="species[]" id="value2" multiple size="30">
<option selected value="base">Please Select</option>
<?php
$filename = '/home/pi/BirdNET-Pi/exclude_species_list.txt';
$eachlines = file($filename, FILE_IGNORE_NEW_LINES);
foreach($eachlines as $lines){
echo "<option value='".$lines."'>$lines</option>";
}?>
</form>
</div>
</div>
</body>
scripts/extract_new_birdsounds.sh
+5
View File
@@ -124,6 +124,11 @@ for h in "${SCAN_DIRS[@]}";do
if (( $(echo "${START} < 1" | bc -l) ));then START=0;fi
if (( $(echo "${END} > ${RECORDING_LENGTH}" | bc -l) ));then END=${RECORDING_LENGTH};fi
if [ "${RECORDING_LENGTH}" == "${EXTRACTION_LENGTH}" ];then
START=0
END=${RECORDING_LENGTH}
fi
ffmpeg -hide_banner -loglevel error -nostdin -i "${h}/${OLDFILE}" \
-acodec copy -ss "${START}" -to "${END}"\
"${NEWSPECIES_BYDATE}/${NEWFILE}"
scripts/filemanager/LICENSE
+674
View File
@@ -0,0 +1,674 @@
GNU GENERAL PUBLIC LICENSE
Version 3, 29 June 2007
Copyright (C) 2007 Free Software Foundation, Inc. <http://fsf.org/>
Everyone is permitted to copy and distribute verbatim copies
of this license document, but changing it is not allowed.
Preamble
The GNU General Public License is a free, copyleft license for
software and other kinds of works.
The licenses for most software and other practical works are designed
to take away your freedom to share and change the works. By contrast,
the GNU General Public License is intended to guarantee your freedom to
share and change all versions of a program--to make sure it remains free
software for all its users. We, the Free Software Foundation, use the
GNU General Public License for most of our software; it applies also to
any other work released this way by its authors. You can apply it to
your programs, too.
When we speak of free software, we are referring to freedom, not
price. Our General Public Licenses are designed to make sure that you
have the freedom to distribute copies of free software (and charge for
them if you wish), that you receive source code or can get it if you
want it, that you can change the software or use pieces of it in new
free programs, and that you know you can do these things.
To protect your rights, we need to prevent others from denying you
these rights or asking you to surrender the rights. Therefore, you have
certain responsibilities if you distribute copies of the software, or if
you modify it: responsibilities to respect the freedom of others.
For example, if you distribute copies of such a program, whether
gratis or for a fee, you must pass on to the recipients the same
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Developers that use the GNU GPL protect your rights with two steps:
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For the developers' and authors' protection, the GPL clearly explains
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Some devices are designed to deny users access to install or run
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Finally, every program is threatened constantly by software patents.
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The precise terms and conditions for copying, distribution and
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of the particular user or of the way in which the particular user
actually uses, or expects or is expected to use, the product. A product
is a consumer product regardless of whether the product has substantial
commercial, industrial or non-consumer uses, unless such uses represent
the only significant mode of use of the product.
"Installation Information" for a User Product means any methods,
procedures, authorization keys, or other information required to install
and execute modified versions of a covered work in that User Product from
a modified version of its Corresponding Source. The information must
suffice to ensure that the continued functioning of the modified object
code is in no case prevented or interfered with solely because
modification has been made.
If you convey an object code work under this section in, or with, or
specifically for use in, a User Product, and the conveying occurs as
part of a transaction in which the right of possession and use of the
User Product is transferred to the recipient in perpetuity or for a
fixed term (regardless of how the transaction is characterized), the
Corresponding Source conveyed under this section must be accompanied
by the Installation Information. But this requirement does not apply
if neither you nor any third party retains the ability to install
modified object code on the User Product (for example, the work has
been installed in ROM).
The requirement to provide Installation Information does not include a
requirement to continue to provide support service, warranty, or updates
for a work that has been modified or installed by the recipient, or for
the User Product in which it has been modified or installed. Access to a
network may be denied when the modification itself materially and
adversely affects the operation of the network or violates the rules and
protocols for communication across the network.
Corresponding Source conveyed, and Installation Information provided,
in accord with this section must be in a format that is publicly
documented (and with an implementation available to the public in
source code form), and must require no special password or key for
unpacking, reading or copying.
7. Additional Terms.
"Additional permissions" are terms that supplement the terms of this
License by making exceptions from one or more of its conditions.
Additional permissions that are applicable to the entire Program shall
be treated as though they were included in this License, to the extent
that they are valid under applicable law. If additional permissions
apply only to part of the Program, that part may be used separately
under those permissions, but the entire Program remains governed by
this License without regard to the additional permissions.
When you convey a copy of a covered work, you may at your option
remove any additional permissions from that copy, or from any part of
it. (Additional permissions may be written to require their own
removal in certain cases when you modify the work.) You may place
additional permissions on material, added by you to a covered work,
for which you have or can give appropriate copyright permission.
Notwithstanding any other provision of this License, for material you
add to a covered work, you may (if authorized by the copyright holders of
that material) supplement the terms of this License with terms:
a) Disclaiming warranty or limiting liability differently from the
terms of sections 15 and 16 of this License; or
b) Requiring preservation of specified reasonable legal notices or
author attributions in that material or in the Appropriate Legal
Notices displayed by works containing it; or
c) Prohibiting misrepresentation of the origin of that material, or
requiring that modified versions of such material be marked in
reasonable ways as different from the original version; or
d) Limiting the use for publicity purposes of names of licensors or
authors of the material; or
e) Declining to grant rights under trademark law for use of some
trade names, trademarks, or service marks; or
f) Requiring indemnification of licensors and authors of that
material by anyone who conveys the material (or modified versions of
it) with contractual assumptions of liability to the recipient, for
any liability that these contractual assumptions directly impose on
those licensors and authors.
All other non-permissive additional terms are considered "further
restrictions" within the meaning of section 10. If the Program as you
received it, or any part of it, contains a notice stating that it is
governed by this License along with a term that is a further
restriction, you may remove that term. If a license document contains
a further restriction but permits relicensing or conveying under this
License, you may add to a covered work material governed by the terms
of that license document, provided that the further restriction does
not survive such relicensing or conveying.
If you add terms to a covered work in accord with this section, you
must place, in the relevant source files, a statement of the
additional terms that apply to those files, or a notice indicating
where to find the applicable terms.
Additional terms, permissive or non-permissive, may be stated in the
form of a separately written license, or stated as exceptions;
the above requirements apply either way.
8. Termination.
You may not propagate or modify a covered work except as expressly
provided under this License. Any attempt otherwise to propagate or
modify it is void, and will automatically terminate your rights under
this License (including any patent licenses granted under the third
paragraph of section 11).
However, if you cease all violation of this License, then your
license from a particular copyright holder is reinstated (a)
provisionally, unless and until the copyright holder explicitly and
finally terminates your license, and (b) permanently, if the copyright
holder fails to notify you of the violation by some reasonable means
prior to 60 days after the cessation.
Moreover, your license from a particular copyright holder is
reinstated permanently if the copyright holder notifies you of the
violation by some reasonable means, this is the first time you have
received notice of violation of this License (for any work) from that
copyright holder, and you cure the violation prior to 30 days after
your receipt of the notice.
Termination of your rights under this section does not terminate the
licenses of parties who have received copies or rights from you under
this License. If your rights have been terminated and not permanently
reinstated, you do not qualify to receive new licenses for the same
material under section 10.
9. Acceptance Not Required for Having Copies.
You are not required to accept this License in order to receive or
run a copy of the Program. Ancillary propagation of a covered work
occurring solely as a consequence of using peer-to-peer transmission
to receive a copy likewise does not require acceptance. However,
nothing other than this License grants you permission to propagate or
modify any covered work. These actions infringe copyright if you do
not accept this License. Therefore, by modifying or propagating a
covered work, you indicate your acceptance of this License to do so.
10. Automatic Licensing of Downstream Recipients.
Each time you convey a covered work, the recipient automatically
receives a license from the original licensors, to run, modify and
propagate that work, subject to this License. You are not responsible
for enforcing compliance by third parties with this License.
An "entity transaction" is a transaction transferring control of an
organization, or substantially all assets of one, or subdividing an
organization, or merging organizations. If propagation of a covered
work results from an entity transaction, each party to that
transaction who receives a copy of the work also receives whatever
licenses to the work the party's predecessor in interest had or could
give under the previous paragraph, plus a right to possession of the
Corresponding Source of the work from the predecessor in interest, if
the predecessor has it or can get it with reasonable efforts.
You may not impose any further restrictions on the exercise of the
rights granted or affirmed under this License. For example, you may
not impose a license fee, royalty, or other charge for exercise of
rights granted under this License, and you may not initiate litigation
(including a cross-claim or counterclaim in a lawsuit) alleging that
any patent claim is infringed by making, using, selling, offering for
sale, or importing the Program or any portion of it.
11. Patents.
A "contributor" is a copyright holder who authorizes use under this
License of the Program or a work on which the Program is based. The
work thus licensed is called the contributor's "contributor version".
A contributor's "essential patent claims" are all patent claims
owned or controlled by the contributor, whether already acquired or
hereafter acquired, that would be infringed by some manner, permitted
by this License, of making, using, or selling its contributor version,
but do not include claims that would be infringed only as a
consequence of further modification of the contributor version. For
purposes of this definition, "control" includes the right to grant
patent sublicenses in a manner consistent with the requirements of
this License.
Each contributor grants you a non-exclusive, worldwide, royalty-free
patent license under the contributor's essential patent claims, to
make, use, sell, offer for sale, import and otherwise run, modify and
propagate the contents of its contributor version.
In the following three paragraphs, a "patent license" is any express
agreement or commitment, however denominated, not to enforce a patent
(such as an express permission to practice a patent or covenant not to
sue for patent infringement). To "grant" such a patent license to a
party means to make such an agreement or commitment not to enforce a
patent against the party.
If you convey a covered work, knowingly relying on a patent license,
and the Corresponding Source of the work is not available for anyone
to copy, free of charge and under the terms of this License, through a
publicly available network server or other readily accessible means,
then you must either (1) cause the Corresponding Source to be so
available, or (2) arrange to deprive yourself of the benefit of the
patent license for this particular work, or (3) arrange, in a manner
consistent with the requirements of this License, to extend the patent
license to downstream recipients. "Knowingly relying" means you have
actual knowledge that, but for the patent license, your conveying the
covered work in a country, or your recipient's use of the covered work
in a country, would infringe one or more identifiable patents in that
country that you have reason to believe are valid.
If, pursuant to or in connection with a single transaction or
arrangement, you convey, or propagate by procuring conveyance of, a
covered work, and grant a patent license to some of the parties
receiving the covered work authorizing them to use, propagate, modify
or convey a specific copy of the covered work, then the patent license
you grant is automatically extended to all recipients of the covered
work and works based on it.
A patent license is "discriminatory" if it does not include within
the scope of its coverage, prohibits the exercise of, or is
conditioned on the non-exercise of one or more of the rights that are
specifically granted under this License. You may not convey a covered
work if you are a party to an arrangement with a third party that is
in the business of distributing software, under which you make payment
to the third party based on the extent of your activity of conveying
the work, and under which the third party grants, to any of the
parties who would receive the covered work from you, a discriminatory
patent license (a) in connection with copies of the covered work
conveyed by you (or copies made from those copies), or (b) primarily
for and in connection with specific products or compilations that
contain the covered work, unless you entered into that arrangement,
or that patent license was granted, prior to 28 March 2007.
Nothing in this License shall be construed as excluding or limiting
any implied license or other defenses to infringement that may
otherwise be available to you under applicable patent law.
12. No Surrender of Others' Freedom.
If conditions are imposed on you (whether by court order, agreement or
otherwise) that contradict the conditions of this License, they do not
excuse you from the conditions of this License. If you cannot convey a
covered work so as to satisfy simultaneously your obligations under this
License and any other pertinent obligations, then as a consequence you may
not convey it at all. For example, if you agree to terms that obligate you
to collect a royalty for further conveying from those to whom you convey
the Program, the only way you could satisfy both those terms and this
License would be to refrain entirely from conveying the Program.
13. Use with the GNU Affero General Public License.
Notwithstanding any other provision of this License, you have
permission to link or combine any covered work with a work licensed
under version 3 of the GNU Affero General Public License into a single
combined work, and to convey the resulting work. The terms of this
License will continue to apply to the part which is the covered work,
but the special requirements of the GNU Affero General Public License,
section 13, concerning interaction through a network will apply to the
combination as such.
14. Revised Versions of this License.
The Free Software Foundation may publish revised and/or new versions of
the GNU General Public License from time to time. Such new versions will
be similar in spirit to the present version, but may differ in detail to
address new problems or concerns.
Each version is given a distinguishing version number. If the
Program specifies that a certain numbered version of the GNU General
Public License "or any later version" applies to it, you have the
option of following the terms and conditions either of that numbered
version or of any later version published by the Free Software
Foundation. If the Program does not specify a version number of the
GNU General Public License, you may choose any version ever published
by the Free Software Foundation.
If the Program specifies that a proxy can decide which future
versions of the GNU General Public License can be used, that proxy's
public statement of acceptance of a version permanently authorizes you
to choose that version for the Program.
Later license versions may give you additional or different
permissions. However, no additional obligations are imposed on any
author or copyright holder as a result of your choosing to follow a
later version.
15. Disclaimer of Warranty.
THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY
APPLICABLE LAW. EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT
HOLDERS AND/OR OTHER PARTIES PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY
OF ANY KIND, EITHER EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO,
THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
PURPOSE. THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM
IS WITH YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF
ALL NECESSARY SERVICING, REPAIR OR CORRECTION.
16. Limitation of Liability.
IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING
WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS
THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY
GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE
USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF
DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD
PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS),
EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF
SUCH DAMAGES.
17. Interpretation of Sections 15 and 16.
If the disclaimer of warranty and limitation of liability provided
above cannot be given local legal effect according to their terms,
reviewing courts shall apply local law that most closely approximates
an absolute waiver of all civil liability in connection with the
Program, unless a warranty or assumption of liability accompanies a
copy of the Program in return for a fee.
END OF TERMS AND CONDITIONS
How to Apply These Terms to Your New Programs
If you develop a new program, and you want it to be of the greatest
possible use to the public, the best way to achieve this is to make it
free software which everyone can redistribute and change under these terms.
To do so, attach the following notices to the program. It is safest
to attach them to the start of each source file to most effectively
state the exclusion of warranty; and each file should have at least
the "copyright" line and a pointer to where the full notice is found.
<one line to give the program's name and a brief idea of what it does.>
Copyright (C) <year> <name of author>
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
Also add information on how to contact you by electronic and paper mail.
If the program does terminal interaction, make it output a short
notice like this when it starts in an interactive mode:
<program> Copyright (C) <year> <name of author>
This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
This is free software, and you are welcome to redistribute it
under certain conditions; type `show c' for details.
The hypothetical commands `show w' and `show c' should show the appropriate
parts of the General Public License. Of course, your program's commands
might be different; for a GUI interface, you would use an "about box".
You should also get your employer (if you work as a programmer) or school,
if any, to sign a "copyright disclaimer" for the program, if necessary.
For more information on this, and how to apply and follow the GNU GPL, see
<http://www.gnu.org/licenses/>.
The GNU General Public License does not permit incorporating your program
into proprietary programs. If your program is a subroutine library, you
may consider it more useful to permit linking proprietary applications with
the library. If this is what you want to do, use the GNU Lesser General
Public License instead of this License. But first, please read
<http://www.gnu.org/philosophy/why-not-lgpl.html>.
scripts/filemanager/SECURITY.md
+27
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@@ -0,0 +1,27 @@
# Security Policy
## Reporting a Vulnerability
The team takes security bugs seriously. We appreciate your efforts to responsibly disclose your findings, and will make every effort to acknowledge your contributions.
To report a security issue, email ccpprogrammers[at]gmail.com and include the word "SECURITY" in the subject line.
The team will send a response indicating the next steps in handling your report. After the initial reply to your report you will be kept informed of the progress towards a fix and full announcement.
Report security bugs in third-party modules to the person or team maintaining the module.
## Disclosure Policy
When the security team receives a security bug report, they will assign it to a
primary handler. This person will coordinate the fix and release process,
involving the following steps:
* Confirm the problem and determine the affected versions.
* Audit code to find any potential similar problems.
* Prepare fixes for all releases still under maintenance. These fixes will be
released as fast as possible to npm.
## Comments on this Policy
If you have suggestions on how this process could be improved please submit a
pull request.
scripts/filemanager/filemanager.php
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scripts/filemanager/translation.json
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scripts/first_boot.php
+153
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@@ -0,0 +1,153 @@
<meta name="viewport" content="width=device-width, initial-scale=1">
<style>
/* Chrome, Safari, Edge, Opera */
input::-webkit-outer-spin-button,
input::-webkit-inner-spin-button {
-webkit-appearance: none;
margin: 0;
}
/* Firefox */
input[type=number] {
-moz-appearance: textfield;
}
* {
font-family: 'Arial', 'Gill Sans', 'Gill Sans MT',
' Calibri', 'Trebuchet MS', 'sans-serif';
box-sizing: border-box;
}
body {
width: 50%;
margin-left: auto;
margin-right: auto;
background-color: rgb(119, 196, 135);
}
a {
text-decoration: none;
}
.block {
display: block;
width:100%;
border: none;
padding: 10px 10px;
font-size: medium;
cursor: pointer;
text-align: center;
}
select {
font-size:large;
width: 60%;
}
select option {
font-size:large;
}
form {
text-align:left;
padding:10px;
}
h1 {
margin-bottom:0px;
}
h3 {
margin-left: -10px;
}
label {
float:left;
width:40%;
font-weight:bold;
}
input {
width:60%;
text-align:center;
font-size:large;
}
.center {
display: block;
margin-left: auto;
margin-right: auto;
}
@media screen and (max-width: 800px) {
h1, h2 {
text-align:center;
}
form {
text-align:left;
margin-left:0px;
}
select, body, button, input, label {
width:100%;
{
}
</style>
</head>
<?php
if (file_exists('/home/pi/BirdNET-Pi/thisrun.txt')) {
$config = parse_ini_file('/home/pi/BirdNET-Pi/thisrun.txt');
} elseif (file_exists('/home/pi/BirdNET-Pi/firstrun.ini')) {
$config = parse_ini_file('/home/pi/BirdNET-Pi/firstrun.ini');
} ?>
<h1 style="float:top;text-align:center;">Welcome!</h1>
<body style="background-color: rgb(119, 196, 135);">
<form action="write_config.php" method="POST" name="firstboot">
<p style="font-size:large">Thank you for installing BirdNET-Pi!
to get started, fill out the Required sections below.</p>
<h2>Required</h2>
<label for="latitude">Latitude: </label>
<input name="latitude" type="number" min="-90" max="90" step="0.0001" value="<?php print($config['LATITUDE']);?>" required/><br>
<label for="longitude">Longitude: </label>
<input name="longitude" type="number" min="-180" max="180" step="0.0001" value="<?php print($config['LONGITUDE']);?>" required/><br>
<h2>Optional Services</h2>
<p>The services below are not required, but they are pretty cool.</p>
<label for="birdweather_id">BirdWeather ID: </label>
<input name="birdweather_id" type="text" value="<?php print($config['BIRDWEATHER_ID']);?>" /><br>
<p>app.BirdWeather.com is a weather map for bird sounds. Stations around the world supply audio and video streams to BirdWeather where they are then analyzed by BirdNET and compared to eBird Grid data. BirdWeather catalogues the detections and visualizations so that you can listen to, view, and read about the birds in various regions across the globe! Pretty cool! <a href="mailto:tim@birdweather.com?subject=Request%20BirdWeather%20ID&body=<?php include('birdweather_request.php'); ?>" target="top">Email Tim</a> to request a BirdWeather ID</p>
<label for="pushed_app_key">Pushed App Key: </label>
<input name="pushed_app_key" type="text" value="" /><br>
<label for="pushed_app_secret">Pushed App Secret: </label>
<input name="pushed_app_secret" type="text" value="" /><br>
<p>Pushed.co is used to offer New Species notifications. Sorry Android users, but the Pushed.co Application is only for iOS.</p>
<label for="language">Database Language: </label>
<select name="language">
<option value="none">English</option>
<option value="labels_af.txt">Afrikaans</option>
<option value="labels_ca.txt">Catalan</option>
<option value="labels_cs.txt">Czech</option>
<option value="labels_zh.txt">Chinese</option>
<option value="labels_hr.txt">Croatian</option>
<option value="labels_da.txt">Danish</option>
<option value="labels_nl.txt">Dutch</option>
<option value="labels_et.txt">Estonian</option>
<option value="labels_fi.txt">Finnish</option>
<option value="labels_fr.txt">French</option>
<option value="labels_de.txt">German</option>
<option value="labels_hu.txt">Hungarian</option>
<option value="labels_is.txt">Icelandic</option>
<option value="labels_id.txt">Indonesia</option>
<option value="labels_it.txt">Italian</option>
<option value="labels_ja.txt">Japanese</option>
<option value="labels_lv.txt">Latvian</option>
<option value="labels_lt.txt">Lithuania</option>
<option value="labels_no.txt">Norwegian</option>
<option value="labels_pl.txt">Polish</option>
<option value="labels_pt.txt">Portugues</option>
<option value="labels_ru.txt">Russian</option>
<option value="labels_sk.txt">Slovak</option>
<option value="labels_sl.txt">Slovenian</option>
<option value="labels_es.txt">Spanish</option>
<option value="labels_sv.txt">Swedish</option>
<option value="labels_th.txt">Thai</option>
<option value="labels_uk.txt">Ukrainian</option>
</select>
<br><br>
</body>
<footer>
<button type="submit" name"firstboot" class="block">I Am Finished!</button>
</footer>
</form>
scripts/include_list.php
+121
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@@ -0,0 +1,121 @@
<meta name="viewport" content="width=device-width, initial-scale=1">
<style>
* {
font-family: 'Arial', 'Gill Sans', 'Gill Sans MT',
' Calibri', 'Trebuchet MS', 'sans-serif';
box-sizing: border-box;
box-sizing: border-box;
}
/* Create two unequal columns that floats next to each other */
.column {
float: left;
padding: 10px;
}
.first {
width: 45%;
}
.second {
width: 10%;
display: flex;
justify-content: center;
flex-direction: column;
height: 100%;
}
.third {
width: 45%;
}
/* Clear floats after the columns */
.row:after {
content: "";
display: table;
clear: both;
}
body {
background-color: rgb(119, 196, 135);
}
a {
text-decoration: none;
color: white;
}
.block {
display: block;
font-weight: bold;
width:100%;
border: none;
background-color: #04AA6D;
padding: 20px 20px;
color: white;
font-size: medium;
cursor: pointer;
text-align: center;
}
h2 {
text-align: center;
}
select {
width:100%
}
@media screen and (max-width: 800px) {
.column {
float: none;
width: 100%;
}
}
</style>
<?php
//remove <script></script> and add php start and close tag
//comment these two lines when code started working fine
error_reporting(E_ALL);
ini_set('display_errors',1);
$filename = 'labels.txt';
$eachlines = file($filename, FILE_IGNORE_NEW_LINES);
?>
<body style="background-color: rgb(119, 196, 135);">
<div class="row">
<div class="column first">
<h2>All Species Labels</h2>
<form action="add_to_include.php" method="POST" id="add">
<select name="species[]" id="species" multiple size="30">
<option selected value="base">Please Select</option>
<?php
foreach($eachlines as $lines){
echo "<option value='".$lines."'>$lines</option>";
}?>
</select>
</form>
</div>
<div class="column second">
<button type="submit" form="add" class="block">Add to list</button><br>
<button type="submit" form="del" class="block">Remove from list</button>
</div>
<div class="column third">
<h2>Included Species List</h2>
<form action="del_from_include.php" method="POST" id="del">
<select name="species[]" id="value2" multiple size="30">
<option selected value="base">Please Select</option>
<?php
$filename = '/home/pi/BirdNET-Pi/include_species_list.txt';
$eachlines = file($filename, FILE_IGNORE_NEW_LINES);
foreach($eachlines as $lines){
echo "<option value='".$lines."'>$lines</option>";
}?>
</form>
</div>
</div>
</body>
scripts/index.html
+26 -36
View File
@@ -1,6 +1,10 @@
<meta name="viewport" content="width=device-width, initial-scale=1">
<style>
* {
font-family: 'Arial', 'Gill Sans', 'Gill Sans MT',
' Calibri', 'Trebuchet MS', 'sans-serif';
box-sizing: border-box;
box-sizing: border-box;
}
@@ -45,55 +49,41 @@ a {
cursor: pointer;
text-align: center;
}
@media screen and (max-width: 800px) {
.column {
float: none;
width: 100%;
@media screen and (max-width: 1000px) {
.column {
float: none;
width: 100%;
}
}
}
</style>
<body style="background-color: rgb(119, 196, 135);">
<div class="row">
<div class="column first">
<form action="/scripts/stop_core_services.php" onclick="return confirm('Stop core services?')">
<button type="submit" class="block">Stop Core Services</button>
</form>
<form action="/scripts/restart_services.php" onclick="return confirm('Restart ALL services?')">
<button type="submit" class="block">Restart ALL Services</button>
</form>
<form action="/scripts/restart_birdnet_analysis.php">
<button type="submit" class="block">Restart BirdNET Analysis</button>
</form>
<form action="/scripts/restart_birdnet_recording.php">
<button type="submit" class="block">Restart Recording</button>
</form>
<form action="/scripts/restart_extraction.php">
<button type="submit" class="block">Restart Extraction</button>
</form>
<form action="/scripts/restart_caddy.php" onclick="return confirm('Restart Caddy? You will be disconnected for about 20 seconds.')">
<button type="submit" class="block">Restart Caddy</button>
</form>
</div>
<div class="column second">
<form >
<button type="submit" class="block"><a target="_content" href="/scripts/adminer.php">Database Maintenance</a></button>
<form action="/scripts/filemanager/filemanager.php" target="_top">
<button type="submit" class="block">File Manager</button>
</form>
<form action="/scripts/adminer.php" target="_top">
<button type="submit" class="block">Database Maintenance</button>
</form>
<form action="/scripts/config.php">
<button type="submit" class="block">Settings</button>
</form>
<form action="/scripts/system_controls.php">
<button type="submit" class="block">System Controls</button>
</form>
<form action="/scripts/reboot_system.php" onclick="return confirm('Are you sure you want to reboot?')">
<button type="submit" class="block">Reboot</button>
</div>
<div class="column second">
<form action="http://birdnetpi.local:8888" target="top">
<button type="submit" class="block">Web Terminal</button>
</form>
<form action="/scripts/update_birdnet.php" onclick="return confirm('BE SURE TO STASH ANY LOCAL CHANGES YOU HAVE MADE TO THE SYSTEM BEFORE UPDATING!!!')">
<button style="color:blue;" type="submit" class="block">Update</button>
<form action="/scripts/service_controls.php">
<button type="submit" class="block">Manage Services</button>
</form>
<form action="/scripts/shutdown_system.php" onclick="return confirm('Are you sure you want to shutdown?')">
<button style="color: red;" type="submit" class="block">Shutdown</button>
<form action="/scripts/include_list.php">
<button type="submit" class="block">Included Species List</button>
</form>
<form action="/scripts/clear_all_data.php" onclick="return confirm('Clear ALL Data? This cannot be undone.')">
<button style="color: red;" type="submit" class="block">Clear ALL data</button>
<form action="/scripts/exclude_list.php">
<button type="submit" class="block">Excluded Species List</button>
</form>
</div>
</div>
scripts/install_config.sh
+4 -4
View File
@@ -238,7 +238,7 @@ ICE_PWD=${ICE_PWD}
## the BirdNET-Pi on your local network, keep this EMPTY.
BIRDNETPI_URL=${BIRDNETPI_URL}
EXTRACTIONLOG_URL${EXTRACTIONLOG_URL}
WEBTERMINAL_URL${WEBTERMINAL_URL}
BIRDNETLOG_URL=${BIRDNETLOG_URL}
@@ -344,10 +344,10 @@ SENSITIVITY=${SENSITIVITY}
CHANNELS=${CHANNELS}
## FULL_DISK can be set to configure how the system reacts to a full disk
## 0 = Remove the oldest day's worth of recordings
## 1 = Keep all data and 'stop_core_services.sh'
## purge = Remove the oldest day's worth of recordings
## keep = Keep all data and 'stop_core_services.sh'
FULL_DISK=0
FULL_DISK=purge
## VENV is the virtual environment where the the BirdNET python build is found,
## i.e, VENV is the virtual environment miniforge built for BirdNET.
scripts/install_services.sh
+85 -59
View File
@@ -12,13 +12,19 @@ gotty_url="https://github.com/yudai/gotty/releases/download/v1.0.1/gotty_linux_a
config_file="$(dirname ${my_dir})/birdnet.conf"
set_hostname() {
if [ "$(hostname)" != "birdnetpi" ];then
if [ "$(hostname)" == "raspberrypi" ];then
echo "Setting hostname to 'birdnetpi'"
hostnamectl set-hostname birdnetpi
sed -i 's/raspberrypi/birdnetpi/g' /etc/hosts
fi
}
install_ftpd() {
if ! [ -f /etc/ftpuseres ];then
apt -y install ftpd
fi
}
update_system() {
apt update && apt -y upgrade
}
@@ -51,9 +57,10 @@ install_birdnet_analysis() {
cat << EOF > /etc/systemd/system/birdnet_analysis.service
[Unit]
Description=BirdNET Analysis
After=birdnet_server.service
Requires=birdnet_server.service
[Service]
Restart=always
RuntimeMaxSec=10800
Type=simple
RestartSec=2
User=${USER}
@@ -64,6 +71,24 @@ EOF
systemctl enable birdnet_analysis.service
}
install_birdnet_server() {
echo "Installing the birdnet_server.service"
cat << EOF > /etc/systemd/system/birdnet_server.service
[Unit]
Description=BirdNET Analysis Server
Before=birdnet_analysis.service
[Service]
Restart=always
Type=simple
RestartSec=10
User=${USER}
ExecStart=/usr/local/bin/server.py
[Install]
WantedBy=multi-user.target
EOF
systemctl enable birdnet_server.service
}
install_extraction_service() {
echo "Installing the extraction.service and extraction.timer"
cat << EOF > /etc/systemd/system/extraction.service
@@ -82,11 +107,9 @@ EOF
[Unit]
Description=BirdNET BirdSound Extraction Timer
Requires=extraction.service
[Timer]
Unit=extraction.service
OnCalendar=*:*:0/10
[Install]
WantedBy=multi-user.target
EOF
@@ -123,29 +146,37 @@ create_necessary_dirs() {
sudo -u ${USER} ln -fs $(dirname ${my_dir})/homepage/* ${EXTRACTED}
if [ ! -z ${BIRDNETLOG_URL} ];then
BIRDNETLOG_URL="$(echo ${BIRDNETLOG_URL} | sed 's/\/\//\\\/\\\//g')"
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/"${BIRDNETLOG_URL}"/g" $(dirname ${my_dir})/homepage/*.html
phpfiles="$(grep -l "birdnetpi.local:8080" ${my_dir}/*.php)"
for i in "${phpfiles[@]}";do
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/"${BIRDNETLOG_URL}"/g" ${i}
done
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/${BIRDNETLOG_URL}/g" $(dirname ${my_dir})/homepage/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/${BIRDNETLOG_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/${BIRDNETLOG_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/${BIRDNETLOG_URL}/g" $(dirname ${my_dir})/scripts/*.php
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/${BIRDNETLOG_URL}/g" $(dirname ${my_dir})/scripts/*/*.php
fi
if [ ! -z ${EXTRACTIONLOG_URL} ];then
EXTRACTIONLOG_URL="$(echo ${EXTRACTIONLOG_URL} | sed 's/\/\//\\\/\\\//g')"
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/"${EXTRACTIONLOG_URL}"/g" $(dirname ${my_dir})/homepage/*.html
phpfiles="$(grep -l "birdnetpi.local:8888" ${my_dir}/*.php)"
for i in "${phpfiles[@]}";do
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/"${EXTRACTIONLOG_URL}"/g" ${i}
done
if [ ! -z ${WEBTERMINAL_URL} ];then
WEBTERMINAL_URL="$(echo ${WEBTERMINAL_URL} | sed 's/\/\//\\\/\\\//g')"
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/${WEBTERMINAL_URL}/g" $(dirname ${my_dir})/homepage/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/${WEBTERMINAL_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/${WEBTERMINAL_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/${WEBTERMINAL_URL}/g" $(dirname ${my_dir})/scripts/*.php
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/${WEBTERMINAL_URL}/g" $(dirname ${my_dir})/scripts/*/*.php
fi
sudo -u ${USER} ln -fs $(dirname ${my_dir})/model/labels.txt ${my_dir}/
sudo -u ${USER} ln -fs $(dirname ${my_dir})/scripts ${EXTRACTED}
if [ ! -z ${BIRDNETPI_URL} ];then
if [ -z ${BIRDNETPI_URL} ];then
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/homepage/*.html
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/scripts/*.php
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/scripts/*/*.php
else
BIRDNETPI_URL="$(echo ${BIRDNETPI_URL} | sed 's/\/\//\\\/\\\//g')"
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/"${BIRDNETPI_URL}"/g" $(dirname ${my_dir})/homepage/*.html
phpfiles="$(grep -l birdnetpi.local ${my_dir}/*.php)"
for i in "${phpfiles[@]}";do
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/"${BIRDNETPI_URL}"/g" ${i}
done
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/homepage/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/scripts/*.php
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/scripts/*/*.php
fi
sudo -u ${USER} ln -fs $(dirname ${my_dir})/scripts/spectrogram.php ${EXTRACTED}
@@ -160,7 +191,8 @@ create_necessary_dirs() {
echo "Setting Wttr.in URL to "${LATITUDE}", "${LONGITUDE}""
sudo -u${USER} sed -i "s/https:\/\/v2.wttr.in\//https:\/\/v2.wttr.in\/"${LATITUDE},${LONGITUDE}"/g" $(dirname ${my_dir})/homepage/menu.html
chmod -R g+rw $(dirname ${my_dir})
chmod -R g+rw ${RECS_DIR}
}
generate_BirdDB() {
@@ -171,6 +203,8 @@ generate_BirdDB() {
elif ! grep Date $(dirname ${my_dir})/BirdDB.txt;then
sudo -u ${USER} sed -i '1 i\Date;Time;Sci_Name;Com_Name;Confidence;Lat;Lon;Cutoff;Week;Sens;Overlap' $(dirname ${my_dir})/BirdDB.txt
fi
ln -sf $(dirname ${my_dir})/BirdDB.txt ${my_dir}/BirdDB.txt &&
chown pi:pi ${my_dir}/BirdDB.txt && chmod g+rw ${my_dir}/BirdDB.txt
}
install_alsa() {
@@ -207,7 +241,6 @@ install_recording_service() {
cat << EOF > /etc/systemd/system/birdnet_recording.service
[Unit]
Description=BirdNET Recording
[Service]
Environment=XDG_RUNTIME_DIR=/run/user/1000
Restart=always
@@ -215,7 +248,6 @@ Type=simple
RestartSec=3
User=${USER}
ExecStart=/usr/local/bin/birdnet_recording.sh
[Install]
WantedBy=multi-user.target
EOF
@@ -249,7 +281,7 @@ install_Caddyfile() {
if ! [ -z ${CADDY_PWD} ];then
HASHWORD=$(caddy hash-password -plaintext ${CADDY_PWD})
cat << EOF > /etc/caddy/Caddyfile
http://localhost http://birdnetpi.local ${BIRDNETPI_URL} {
http://localhost http://$(hostname).local ${BIRDNETPI_URL} {
root * ${EXTRACTED}
file_server browse
basicauth /Processed* {
@@ -270,7 +302,7 @@ http://localhost http://birdnetpi.local ${BIRDNETPI_URL} {
EOF
else
cat << EOF > /etc/caddy/Caddyfile
http://localhost http://birdnetpi.local ${BIRDNETPI_URL} {
http://localhost http://$(hostname).local ${BIRDNETPI_URL} {
root * ${EXTRACTED}
file_server browse
reverse_proxy /stream localhost:8000
@@ -279,17 +311,25 @@ http://localhost http://birdnetpi.local ${BIRDNETPI_URL} {
EOF
fi
if [ ! -z ${EXTRACTIONLOG_URL} ];then
if [ ! -z ${WEBTERMINAL_URL} ] && [ ! -z ${HASHWORD} ];then
cat << EOF >> /etc/caddy/Caddyfile
${EXTRACTIONLOG_URL} {
${WEBTERMINAL_URL} {
basicauth {
birdnet ${HASHWORD}
}
reverse_proxy localhost:8888
}
EOF
elif [ ! -z ${WEBTERMINAL_URL} ] && [ -z ${HASHWORD} ];then
cat << EOF >> /etc/caddy/Caddyfile
${WEBTERMINAL_URL} {
reverse_proxy localhost:8888
}
EOF
fi
if [ ! -z ${BIRDNETLOG_URL} ];then
cat << EOF >> /etc/caddy/Caddyfile
${BIRDNETLOG_URL} {
reverse_proxy localhost:8080
}
@@ -299,10 +339,7 @@ EOF
}
update_etc_hosts() {
#BIRDNETPI_URL="$(echo ${BIRDNETPI_URL} | sed 's/\/\//\\\/\\\//g')"
#EXTRACTIONLOG_URL="$(echo ${EXTRACTIONLOG_URL} | sed 's/\/\//\\\/\\\//g')"
#BIRDNETLOG_URL="$(echo ${BIRDNETLOG_URL} | sed 's/\/\//\\\/\\\//g')"
sed -ie s/'birdnetpi.local'/"birdnetpi.local ${BIRDNETPI_URL//https:\/\/} ${EXTRACTIONLOG_URL//https:\/\/} ${BIRDNETLOG_URL//https:\/\/}"/g /etc/hosts
sed -ie s/'$(hostname).local'/"$(hostname).local ${BIRDNETPI_URL//https:\/\/} ${WEBTERMINAL_URL//https:\/\/} ${BIRDNETLOG_URL//https:\/\/}"/g /etc/hosts
}
install_avahi_aliases() {
@@ -317,17 +354,15 @@ install_avahi_aliases() {
Description=Publish %I as alias for %H.local via mdns
After=network.target network-online.target
Requires=network-online.target
[Service]
Restart=always
RestartSec=3
Type=simple
ExecStart=/bin/bash -c "/usr/bin/avahi-publish -a -R %I $(hostname -I |cut -d' ' -f1)"
[Install]
WantedBy=multi-user.target
EOF
systemctl enable avahi-alias@birdnetpi.local.service
systemctl enable avahi-alias@"$(hostname)".local.service
}
install_spectrogram_service() {
@@ -351,7 +386,6 @@ install_chart_viewer_service() {
cat << EOF > /etc/systemd/system/chart_viewer.service
[Unit]
Description=BirdNET-Pi Chart Viewer Service
[Service]
Restart=always
RestartSec=300
@@ -372,40 +406,38 @@ install_gotty_logs() {
fi
sudo -u ${USER} ln -sf $(dirname ${my_dir})/templates/gotty \
${HOME}/.gotty
sudo -u ${USER} ln -sf $(dirname ${my_dir})/templates/bashrc \
${HOME}/.bashrc
echo "Installing the birdnet_log.service"
cat << EOF > /etc/systemd/system/birdnet_log.service
[Unit]
Description=BirdNET Analysis Log
[Service]
Restart=on-failure
RestartSec=3
Type=simple
User=${USER}
Environment=TERM=xterm-256color
ExecStart=/usr/local/bin/gotty -p 8080 --title-format "BirdNET-Pi Log" journalctl -o cat -fu birdnet_analysis.service
ExecStart=/usr/local/bin/gotty -p 8080 --title-format "BirdNET-Pi Log" journalctl -o cat -fu birdnet_server.service
[Install]
WantedBy=multi-user.target
EOF
systemctl enable birdnet_log.service
echo "Installing the extraction_log.service"
cat << EOF > /etc/systemd/system/extraction_log.service
echo "Installing the web_terminal.service"
cat << EOF > /etc/systemd/system/web_terminal.service
[Unit]
Description=BirdNET Extraction Log
Description=BirdNET-Pi Web Terminal
[Service]
Restart=on-failure
RestartSec=3
Type=simple
User=${USER}
Environment=TERM=xterm-256color
ExecStart=/usr/local/bin/gotty -p 8888 --title-format "Extractions Log" journalctl -o cat -fu extraction.service
ExecStart=/usr/local/bin/gotty -w -p 8888 --title-format "BirdNET-Pi Terminal" bash
[Install]
WantedBy=multi-user.target
EOF
systemctl enable extraction_log.service
systemctl enable web_terminal.service
}
install_sox() {
@@ -423,7 +455,7 @@ install_php() {
if ! which php &> /dev/null || ! which php-fpm || ! apt list --installed | grep php-xml;then
echo "Installing PHP modules"
apt -qq update
apt install -qqy php php-fpm php-mysql php-xml
apt install -qqy php php-fpm php-mysql php-xml php-zip
else
echo "PHP and PHP-FPM installed"
fi
@@ -477,7 +509,6 @@ install_livestream_service() {
Description=BirdNET-Pi Live Stream
After=network-online.target
Requires=network-online.target
[Service]
Environment=XDG_RUNTIME_DIR=/run/user/1000
Restart=always
@@ -485,7 +516,6 @@ Type=simple
RestartSec=3
User=${USER}
ExecStart=/usr/local/bin/livestream.sh
[Install]
WantedBy=multi-user.target
EOF
@@ -505,13 +535,7 @@ install_nomachine() {
install_cleanup_cron() {
echo "Installing the cleanup.cron"
if ! crontab -u ${USER} -l &> /dev/null;then
crontab -u ${USER} $(dirname ${my_dir})/templates/cleanup.cron &> /dev/null
else
crontab -u ${USER} -l > ${tmpfile}
cat $(dirname ${my_dir})/templates/cleanup.cron >> ${tmpfile}
crontab -u ${USER} "${tmpfile}" &> /dev/null
fi
cat $(dirname ${my_dir})/templates/cleanup.cron >> /etc/crontab
}
install_selected_services() {
@@ -519,6 +543,7 @@ install_selected_services() {
update_system
install_scripts
install_birdnet_analysis
install_birdnet_server
if [[ "${DO_EXTRACTIONS}" =~ [Yy] ]];then
install_extraction_service
@@ -553,6 +578,7 @@ install_selected_services() {
create_necessary_dirs
generate_BirdDB
install_cleanup_cron
install_ftpd
}
if [ -f ${config_file} ];then
scripts/network_info.sh
Executable
+9
View File
@@ -0,0 +1,9 @@
#!/usr/bin/env bash
#Display network info for phpsysinfo
echo "LAN IP: $(hostname -I|cut -d' ' -f1)"
echo "Public IP: $(curl -s4 ifconfig.co)"
echo
echo "------------------------------"
echo ' $(ip a) '
ip a
scripts/overview.php
+17 -19
View File
@@ -1,4 +1,7 @@
<?php
ini_set('display_errors', 1);
ini_set('display_startup_errors', 1);
error_reporting(E_ALL);
header("refresh: 300;");
$myDate = date('d-m-Y');
$chart = "Combo-$myDate.png";
@@ -12,31 +15,26 @@ if ($mysqli->connect_error) {
}
// SQL query to select data from database
$sql0 = "SELECT * FROM detections";
$fulltable = $mysqli->query($sql0);
$totalcount = mysqli_num_rows($fulltable);
$sql0 = "SELECT COUNT(*) AS 'Total' FROM detections";
$totalcount = $mysqli->query($sql0);
$sql1 = "SELECT Com_Name, Date, Time FROM detections
ORDER BY Date DESC, Time DESC LIMIT 1";
$mostrecent = $mysqli->query($sql1);
$sql2 = "SELECT * FROM detections
$sql2 = "SELECT COUNT(*) AS 'Total' FROM detections
WHERE Date = CURDATE()";
$todaystable = $mysqli->query($sql2);
$todayscount = mysqli_num_rows($todaystable);
$todayscount = $mysqli->query($sql2);
$sql3 = "SELECT * FROM detections
$sql3 = "SELECT COUNT(*) AS 'Total' FROM detections
WHERE Date = CURDATE()
AND Time >= DATE_SUB(NOW(),INTERVAL 1 HOUR)";
$lasthourtable = $mysqli->query($sql3);
$lasthourcount = mysqli_num_rows($lasthourtable);
$lasthourcount = $mysqli->query($sql3);
$sql4 = "SELECT Com_Name, Date, Time, MAX(Confidence)
FROM detections
WHERE Date = CURDATE()
GROUP BY Com_Name
ORDER BY MAX(Confidence) DESC";
$sql4 = "SELECT Com_Name
FROM detections
WHERE Date = CURDATE()
GROUP BY Com_Name";
$specieslist = $mysqli->query($sql4);
$speciescount = mysqli_num_rows($specieslist);
@@ -104,9 +102,9 @@ while($rows=$mostrecent ->fetch_assoc())
</tr>
<tr>
<th>Number of Detections</th>
<td><?php echo $totalcount;?></td>
<td><?php echo $todayscount;?></td>
<td><?php echo $lasthourcount;?></td>
<td><?php while ($row = $totalcount->fetch_assoc()) { echo $row['Total']; };?></td>
<td><?php while ($row = $todayscount->fetch_assoc()) { echo $row['Total']; };?></td>
<td><?php while ($row = $lasthourcount->fetch_assoc()) { echo $row['Total']; };?></td>
</tr>
</table>
</div>
@@ -122,7 +120,7 @@ while($rows=$mostrecent ->fetch_assoc())
<h2>Today's Top 10 Species</h2>
<?php
if (file_exists('/home/pi/BirdSongs/Extracted/Charts/'.$chart)) {
echo "<img src=\"/Charts/$chart?nocache=$time()\" style=\"width: 100%;padding: 5px;margin-left: auto;margin-right: auto;display: block;\">";
echo "<img src=\"/Charts/$chart?nocache=time()\" style=\"width: 100%;padding: 5px;margin-left: auto;margin-right: auto;display: block;\">";
} else {
echo "<p style=\"text-align:center;margin-left:-150px;\">No Detections For Today</p>";
}
scripts/pretty_date.sh
-14
View File
@@ -1,14 +0,0 @@
#!/usr/bin/env bash
# Pretty date suffixes
TODAY="$(date +%e)"
if [[ $TODAY == ' 1' ]] || [[ $TODAY == 21 ]] || [[ $TODAY == 31 ]]; then
SUFFIX="st"
elif [[ $TODAY == ' 2' ]] || [[ $TODAY == 22 ]];then
SUFFIX="nd"
elif [[ $TODAY == ' 3' ]] || [[ $TODAY == 23 ]];then
SUFFIX="rd"
else
SUFFIX="th"
fi
echo "$SUFFIX"
scripts/rebuild_db.sh
+1 -1
View File
@@ -2,7 +2,7 @@
# Rebuild DB from BirdDB.txt
source /etc/birdnet/birdnet.conf
BIRDNET_DIR=/home/pi/BirdNET-Pi
sudo ${BIRDNET_DIR}/scripts/createdb.sh
sudo ${BIRDNET_DIR}/scripts/createdb_bullseye.sh
sudo mysql birds -e "
LOAD DATA LOCAL INFILE '/home/pi/BirdNET-Pi/BirdDB.txt'
INTO TABLE detections
scripts/reconfigure_birdnet_gui.sh
+1 -1
View File
@@ -37,7 +37,7 @@ fi
if ! [ -z ${birdnetpi_url} ];then
sed -i s/'^BIRDNETPI_URL=.*'/"BIRDNETPI_URL=${birdnetpi_url/\/\//\\\/\\\/}"/g ${birdnet_conf}
sed -i s/'^EXTRACTIONLOG_URL=.*'/"EXTRACTIONLOG_URL=${extractionlog_url/\/\//\\\/\\\/}"/g ${birdnet_conf}
sed -i s/'^WEBTERMINAL_URL=.*'/"WEBTERMINAL_URL=${extractionlog_url/\/\//\\\/\\\/}"/g ${birdnet_conf}
sed -i s/'^BIRDNETLOG_URL=.*'/"BIRDNETLOG_URL=${birdnetlog_url/\/\//\\\/\\\/}"/g ${birdnet_conf}
fi
scripts/restart_services.sh
+14 -4
View File
@@ -1,15 +1,25 @@
#!/usr/bin/env bash
# Restarts ALL services and removes ALL unprocessed audio
source /etc/birdnet/birdnet.conf
set -x
my_dir=/home/pi/BirdNET-Pi/scripts
sudo systemctl stop birdnet_recording.service
sudo rm -rf ${RECS_DIR}/$(date +%B-%Y/%d-%A)/*
sudo systemctl start birdnet_recording.service
services=($(awk '/service/ && /systemctl/ && !/php/ {print $3}' ${my_dir}/install_services.sh | sort))
services=(web_terminal.service
spectrogram_viewer.service
pushed_notifications.service
livestream.service
icecast2.service
extraction.timer
extraction.service
chart_viewer.service
birdnet_recording.service
birdnet_log.service
birdnet_server.service
birdnet_analysis.service)
sudo pkill server.py
for i in "${services[@]}";do
sudo systemctl restart "${i}"
done
sudo systemctl restart extraction.timer
scripts/rewrite_config.sh
+1 -1
View File
@@ -30,7 +30,7 @@ fi
if ! [ -z ${birdnetpi_url} ];then
sed -i s/'^BIRDNETPI_URL=.*'/"BIRDNETPI_URL=${birdnetpi_url/\/\//\\\/\\\/}"/g ${birdnet_conf}
sed -i s/'^EXTRACTIONLOG_URL=.*'/"EXTRACTIONLOG_URL=${extractionlog_url/\/\//\\\/\\\/}"/g ${birdnet_conf}
sed -i s/'^WEBTERMINAL_URL=.*'/"WEBTERMINAL_URL=${extractionlog_url/\/\//\\\/\\\/}"/g ${birdnet_conf}
sed -i s/'^BIRDNETLOG_URL=.*'/"BIRDNETLOG_URL=${birdnetlog_url/\/\//\\\/\\\/}"/g ${birdnet_conf}
fi
scripts/server.py
Executable
+431
View File
@@ -0,0 +1,431 @@
#!/home/pi/BirdNET-Pi/birdnet/bin/python3
import socket
import threading
import os
os.environ['TF_CPP_MIN_LOG_LEVEL'] = '3'
os.environ['CUDA_VISIBLE_DEVICES'] = ''
try:
import tflite_runtime.interpreter as tflite
except:
from tensorflow import lite as tflite
import argparse
import operator
import librosa
import numpy as np
import math
import time
from decimal import Decimal
import json
###############################################################################
import requests
import mysql.connector
###############################################################################
import datetime
import pytz
from tzlocal import get_localzone
from pathlib import Path
HEADER = 64
PORT = 5050
SERVER = socket.gethostbyname(socket.gethostname())
ADDR = (SERVER, PORT)
FORMAT = 'utf-8'
DISCONNECT_MESSAGE = "!DISCONNECT"
server = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
server.bind(ADDR)
# Open most recent Configuration and grab DB_PWD as a python variable
with open('/home/pi/BirdNET-Pi/thisrun.txt', 'r') as f:
this_run = f.readlines()
db_pwd = str(str(str([i for i in this_run if i.startswith('DB_PWD')]).split('=')[1]).split('\\')[0])
def loadModel():
global INPUT_LAYER_INDEX
global OUTPUT_LAYER_INDEX
global MDATA_INPUT_INDEX
global CLASSES
print('LOADING TF LITE MODEL...', end=' ')
# Load TFLite model and allocate tensors.
myinterpreter = tflite.Interpreter(model_path='/home/pi/BirdNET-Pi/model/BirdNET_6K_GLOBAL_MODEL.tflite',num_threads=2)
myinterpreter.allocate_tensors()
# Get input and output tensors.
input_details = myinterpreter.get_input_details()
output_details = myinterpreter.get_output_details()
# Get input tensor index
INPUT_LAYER_INDEX = input_details[0]['index']
MDATA_INPUT_INDEX = input_details[1]['index']
OUTPUT_LAYER_INDEX = output_details[0]['index']
# Load labels
CLASSES = []
with open('/home/pi/BirdNET-Pi/model/labels.txt', 'r') as lfile:
for line in lfile.readlines():
CLASSES.append(line.replace('\n', ''))
print('DONE!')
return myinterpreter
def loadCustomSpeciesList(path):
slist = []
if os.path.isfile(path):
with open(path, 'r') as csfile:
for line in csfile.readlines():
slist.append(line.replace('\r', '').replace('\n', ''))
return slist
def splitSignal(sig, rate, overlap, seconds=3.0, minlen=1.5):
# Split signal with overlap
sig_splits = []
for i in range(0, len(sig), int((seconds - overlap) * rate)):
split = sig[i:i + int(seconds * rate)]
# End of signal?
if len(split) < int(minlen * rate):
break
# Signal chunk too short? Fill with zeros.
if len(split) < int(rate * seconds):
temp = np.zeros((int(rate * seconds)))
temp[:len(split)] = split
split = temp
sig_splits.append(split)
return sig_splits
def readAudioData(path, overlap, sample_rate=48000):
print('READING AUDIO DATA...', end=' ', flush=True)
# Open file with librosa (uses ffmpeg or libav)
sig, rate = librosa.load(path, sr=sample_rate, mono=True, res_type='kaiser_fast')
# Split audio into 3-second chunks
chunks = splitSignal(sig, rate, overlap)
print('DONE! READ', str(len(chunks)), 'CHUNKS.')
return chunks
def convertMetadata(m):
# Convert week to cosine
if m[2] >= 1 and m[2] <= 48:
m[2] = math.cos(math.radians(m[2] * 7.5)) + 1
else:
m[2] = -1
# Add binary mask
mask = np.ones((3,))
if m[0] == -1 or m[1] == -1:
mask = np.zeros((3,))
if m[2] == -1:
mask[2] = 0.0
return np.concatenate([m, mask])
def custom_sigmoid(x, sensitivity=1.0):
return 1 / (1.0 + np.exp(-sensitivity * x))
def predict(sample, sensitivity):
global INTERPRETER
# Make a prediction
INTERPRETER.set_tensor(INPUT_LAYER_INDEX, np.array(sample[0], dtype='float32'))
INTERPRETER.set_tensor(MDATA_INPUT_INDEX, np.array(sample[1], dtype='float32'))
INTERPRETER.invoke()
prediction = INTERPRETER.get_tensor(OUTPUT_LAYER_INDEX)[0]
# Apply custom sigmoid
p_sigmoid = custom_sigmoid(prediction, sensitivity)
# Get label and scores for pooled predictions
p_labels = dict(zip(CLASSES, p_sigmoid))
# Sort by score
p_sorted = sorted(p_labels.items(), key=operator.itemgetter(1), reverse=True)
# Remove species that are on blacklist
for i in range(min(10, len(p_sorted))):
if p_sorted[i][0] in ['Human_Human', 'Non-bird_Non-bird', 'Noise_Noise']:
p_sorted[i] = (p_sorted[i][0], 0.0)
# Only return first the top ten results
return p_sorted[:10]
def analyzeAudioData(chunks, lat, lon, week, sensitivity, overlap,):
global INTERPRETER
detections = {}
start = time.time()
print('ANALYZING AUDIO...', end=' ', flush=True)
# Convert and prepare metadata
mdata = convertMetadata(np.array([lat, lon, week]))
mdata = np.expand_dims(mdata, 0)
# Parse every chunk
pred_start = 0.0
for c in chunks:
# Prepare as input signal
sig = np.expand_dims(c, 0)
# Make prediction
p = predict([sig, mdata], sensitivity)
# Save result and timestamp
pred_end = pred_start + 3.0
detections[str(pred_start) + ';' + str(pred_end)] = p
pred_start = pred_end - overlap
print('DONE! Time', int((time.time() - start) * 10) / 10.0, 'SECONDS')
return detections
def writeResultsToFile(detections, min_conf, path):
print('WRITING RESULTS TO', path, '...', end=' ')
rcnt = 0
with open(path, 'w') as rfile:
rfile.write('Start (s);End (s);Scientific name;Common name;Confidence\n')
for d in detections:
for entry in detections[d]:
if entry[1] >= min_conf and ((entry[0] in INCLUDE_LIST or len(INCLUDE_LIST) == 0) and (entry[0] not in EXCLUDE_LIST or len(EXCLUDE_LIST) == 0) ):
rfile.write(d + ';' + entry[0].replace('_', ';') + ';' + str(entry[1]) + '\n')
rcnt += 1
print('DONE! WROTE', rcnt, 'RESULTS.')
return
def handle_client(conn, addr):
global INCLUDE_LIST
global EXCLUDE_LIST
print(f"[NEW CONNECTION] {addr} connected.")
connected = True
while connected:
msg_length = conn.recv(HEADER).decode(FORMAT)
if msg_length:
msg_length = int(msg_length)
msg = conn.recv(msg_length).decode(FORMAT)
if msg == DISCONNECT_MESSAGE:
connected = False
else:
#print(f"[{addr}] {msg}")
args = type('', (), {})()
args.i = '/home/pi/test.wav'
args.o = '/home/pi/test.wav.csv'
args.birdweather_id = '99999'
args.include_list = 'null'
args.exclude_list = 'null'
args.overlap = 0.0
args.week = -1
args.sensitivity = 1.25
args.min_conf = 0.70
args.lat = -1
args.lon = -1
for line in msg.split('||'):
inputvars = line.split('=')
if inputvars[0] == 'i':
args.i = inputvars[1]
elif inputvars[0] == 'o':
args.o = inputvars[1]
elif inputvars[0] == 'birdweather_id':
args.birdweather_id = inputvars[1]
elif inputvars[0] == 'include_list':
args.include_list = inputvars[1]
elif inputvars[0] == 'exclude_list':
args.exclude_list = inputvars[1]
elif inputvars[0] == 'overlap':
args.overlap = float(inputvars[1])
elif inputvars[0] == 'week':
args.week = int(inputvars[1])
elif inputvars[0] == 'sensitivity':
args.sensitivity = float(inputvars[1])
elif inputvars[0] == 'min_conf':
args.min_conf = float(inputvars[1])
elif inputvars[0] == 'lat':
args.lat = float(inputvars[1])
elif inputvars[0] == 'lon':
args.lon = float(inputvars[1])
# Load custom species lists - INCLUDED and EXCLUDED
if not args.include_list == 'null':
INCLUDE_LIST = loadCustomSpeciesList(args.include_list)
else:
INCLUDE_LIST = []
if not args.exclude_list == 'null':
EXCLUDE_LIST = loadCustomSpeciesList(args.exclude_list)
else:
EXCLUDE_LIST = []
birdweather_id = args.birdweather_id
# Read audio data
audioData = readAudioData(args.i, args.overlap)
# Get Date/Time from filename in case Pi gets behind
#now = datetime.now()
full_file_name = args.i
print('FULL FILENAME: -' + full_file_name + '-')
file_name = Path(full_file_name).stem
file_date = file_name.split('-birdnet-')[0]
file_time = file_name.split('-birdnet-')[1]
date_time_str = file_date + ' ' + file_time
date_time_obj = datetime.datetime.strptime(date_time_str, '%Y-%m-%d %H:%M:%S')
#print('Date:', date_time_obj.date())
#print('Time:', date_time_obj.time())
print('Date-time:', date_time_obj)
now = date_time_obj
current_date = now.strftime("%Y/%m/%d")
current_time = now.strftime("%H:%M:%S")
current_iso8601 = now.astimezone(get_localzone()).isoformat()
week_number = int(now.strftime("%V"))
week = max(1, min(week_number, 48))
sensitivity = max(0.5, min(1.0 - (args.sensitivity - 1.0), 1.5))
# Process audio data and get detections
detections = analyzeAudioData(audioData, args.lat, args.lon, week, sensitivity, args.overlap)
# Write detections to output file
min_conf = max(0.01, min(args.min_conf, 0.99))
writeResultsToFile(detections, min_conf, args.o)
###############################################################################
###############################################################################
soundscape_uploaded = False
# Write detections to Database
myReturn = ''
for i in detections:
print("\n", detections[i][0],"\n")
myReturn += str(detections[i][0]) + '||'
with open('/home/pi/BirdNET-Pi/BirdDB.txt', 'a') as rfile:
for d in detections:
for entry in detections[d]:
if entry[1] >= min_conf and ((entry[0] in INCLUDE_LIST or len(INCLUDE_LIST) == 0) and (entry[0] not in EXCLUDE_LIST or len(EXCLUDE_LIST) == 0) ):
rfile.write(str(current_date) + ';' + str(current_time) + ';' + entry[0].replace('_', ';') + ';' \
+ str(entry[1]) +";" + str(args.lat) + ';' + str(args.lon) + ';' + str(min_conf) + ';' + str(week) + ';' \
+ str(sensitivity) +';' + str(args.overlap) + '\n')
def insert_variables_into_table(Date, Time, Sci_Name, Com_Name, Confidence, Lat, Lon, Cutoff, Week, Sens, Overlap):
try:
connection = mysql.connector.connect(host='localhost',
database='birds',
user='birder',
password=db_pwd)
cursor = connection.cursor()
mySql_insert_query = """INSERT INTO detections (Date, Time, Sci_Name, Com_Name, Confidence, Lat, Lon, Cutoff, Week, Sens, Overlap)
VALUES (%s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s) """
record = (Date, Time, Sci_Name, Com_Name, Confidence, Lat, Lon, Cutoff, Week, Sens, Overlap)
cursor.execute(mySql_insert_query, record)
connection.commit()
print("Record inserted successfully into detections table")
except mysql.connector.Error as error:
print("Failed to insert record into detections table {}".format(error))
finally:
if connection.is_connected():
connection.close()
print("MySQL connection is closed")
species = entry[0]
sci_name,com_name = species.split('_')
insert_variables_into_table(str(current_date), str(current_time), sci_name, com_name, \
str(entry[1]), str(args.lat), str(args.lon), str(min_conf), str(week), \
str(args.sensitivity), str(args.overlap))
print(str(current_date) + ';' + str(current_time) + ';' + entry[0].replace('_', ';') + ';' + str(entry[1]) +";" + str(args.lat) + ';' + str(args.lon) + ';' + str(min_conf) + ';' + str(week) + ';' + str(args.sensitivity) +';' + str(args.overlap) + '\n')
if birdweather_id != "99999":
if soundscape_uploaded is False:
# POST soundscape to server
soundscape_url = "https://app.birdweather.com/api/v1/stations/" + birdweather_id + "/soundscapes" + "?timestamp=" + current_iso8601
with open(args.i, 'rb') as f:
wav_data = f.read()
response = requests.post(url=soundscape_url, data=wav_data, headers={'Content-Type': 'application/octet-stream'})
print("Soundscape POST Response Status - ", response.status_code)
sdata = response.json()
soundscape_id = sdata['soundscape']['id']
soundscape_uploaded = True
# POST detection to server
detection_url = "https://app.birdweather.com/api/v1/stations/" + birdweather_id + "/detections"
start_time = d.split(';')[0]
end_time = d.split(';')[1]
post_begin = "{ "
now_p_start = now + datetime.timedelta(seconds=float(start_time))
current_iso8601 = now_p_start.astimezone(get_localzone()).isoformat()
post_timestamp = "\"timestamp\": \"" + current_iso8601 + "\","
post_lat = "\"lat\": " + str(args.lat) + ","
post_lon = "\"lon\": " + str(args.lon) + ","
post_soundscape_id = "\"soundscapeId\": " + str(soundscape_id) + ","
post_soundscape_start_time = "\"soundscapeStartTime\": " + start_time + ","
post_soundscape_end_time = "\"soundscapeEndTime\": " + end_time + ","
post_commonName = "\"commonName\": \"" + entry[0].split('_')[1] + "\","
post_scientificName = "\"scientificName\": \"" + entry[0].split('_')[0] + "\","
post_algorithm = "\"algorithm\": " + "\"alpha\"" + ","
post_confidence = "\"confidence\": " + str(entry[1])
post_end = " }"
post_json = post_begin + post_timestamp + post_lat + post_lon + post_soundscape_id + post_soundscape_start_time + post_soundscape_end_time + post_commonName + post_scientificName + post_algorithm + post_confidence + post_end
print(post_json)
response = requests.post(detection_url, json=json.loads(post_json))
print("Detection POST Response Status - ", response.status_code)
conn.send("Msg received".encode(FORMAT))
#time.sleep(3)
conn.close()
def start():
# Load model
global INTERPRETER, INCLUDE_LIST, EXCLUDE_LIST
INTERPRETER = loadModel()
server.listen()
print(f"[LISTENING] Server is listening on {SERVER}")
while True:
conn, addr = server.accept()
thread = threading.Thread(target=handle_client, args=(conn, addr))
thread.start()
print(f"[ACTIVE CONNECTIONS] {threading.activeCount() - 1}")
print("[STARTING] server is starting...")
start()
scripts/service_controls.php
+82
View File
@@ -0,0 +1,82 @@
<meta name="viewport" content="width=device-width, initial-scale=1">
<style>
* {
font-family: 'Arial', 'Gill Sans', 'Gill Sans MT',
' Calibri', 'Trebuchet MS', 'sans-serif';
box-sizing: border-box;
box-sizing: border-box;
}
/* Create two unequal columns that floats next to each other */
.column {
float: left;
padding: 10px;
}
.first {
width: calc(50% - 70px);
}
.second {
width: calc(50% - 30px);
}
/* Clear floats after the columns */
.row:after {
content: "";
display: table;
clear: both;
}
body {
background-color: rgb(119, 196, 135);
}
a {
text-decoration: none;
color: white;
}
.block {
display: block;
font-weight: bold;
width:100%;
border: none;
background-color: #04AA6D;
padding: 20px 20px;
color: white;
font-size: medium;
cursor: pointer;
text-align: center;
}
@media screen and (max-width: 800px) {
.column {
float: none;
width: 100%;
}
}
</style>
<body style="background-color: rgb(119, 196, 135);">
<div class="row">
<div class="column first">
<form action="/scripts/stop_core_services.php" onclick="return confirm('Stop core services?')">
<button type="submit" class="block">Stop Core Services</button>
</form>
<form action="/scripts/restart_services.php" onclick="return confirm('Restart ALL services?')">
<button type="submit" class="block">Restart ALL Services</button>
</form>
<form action="/scripts/restart_birdnet_analysis.php">
<button type="submit" class="block">Restart BirdNET Analysis</button>
</form>
<form action="/scripts/restart_birdnet_recording.php">
<button type="submit" class="block">Restart Recording</button>
</form>
<form action="/scripts/restart_extraction.php">
<button type="submit" class="block">Restart Extraction</button>
</form>
<form action="/scripts/restart_caddy.php" onclick="return confirm('Restart Caddy? You will be disconnected for about 20 seconds.')">
<button type="submit" class="block">Restart Caddy</button>
</form>
</div>
</div>
</body>
scripts/spectrogram.php
+8 -2
View File
@@ -1,5 +1,11 @@
<?php
header("refresh: 15;");
echo "<body style='background-color:rgb(119, 196, 135)'>";
if (file_exists('/home/pi/BirdNET-Pi/thisrun.txt')) {
$config = parse_ini_file('/home/pi/BirdNET-Pi/thisrun.txt');
} elseif (file_exists('/home/pi/BirdNET-Pi/firstrun.ini')) {
$config = parse_ini_file('/home/pi/BirdNET-Pi/firstrun.ini');
}
$refreshtime = $config['RECORDING_LENGTH'];
header("refresh:$refreshtime");
?>
<body style='background-color:rgb(119, 196, 135)'>
<img src='/spectrogram.png?nocache=<?php echo time();?>' style='display: block; height: 100%; width: 100%;'>
scripts/stop_core_services.sh
+1
View File
@@ -4,6 +4,7 @@
services=(birdnet_recording.service
birdnet_analysis.service
birdnet_server.service
chart_viewer.service
extraction.timer
spectrogram_viewer.service)
scripts/system_controls.php
+75
View File
@@ -0,0 +1,75 @@
<meta name="viewport" content="width=device-width, initial-scale=1">
<style>
* {
font-family: 'Arial', 'Gill Sans', 'Gill Sans MT',
' Calibri', 'Trebuchet MS', 'sans-serif';
box-sizing: border-box;
box-sizing: border-box;
}
/* Create two unequal columns that floats next to each other */
.column {
float: left;
padding: 10px;
}
.first {
width: calc(50% - 70px);
}
.second {
width: calc(50% - 30px);
}
/* Clear floats after the columns */
.row:after {
content: "";
display: table;
clear: both;
}
body {
background-color: rgb(119, 196, 135);
}
a {
text-decoration: none;
color: white;
}
.block {
display: block;
font-weight: bold;
width:100%;
border: none;
background-color: #04AA6D;
padding: 20px 20px;
color: white;
font-size: medium;
cursor: pointer;
text-align: center;
}
@media screen and (max-width: 800px) {
.column {
float: none;
width: 100%;
}
}
</style>
<body style="background-color: rgb(119, 196, 135);">
<div class="row">
<div class="column first">
<form action="/scripts/reboot_system.php" onclick="return confirm('Are you sure you want to reboot?')">
<button type="submit" class="block">Reboot</button>
</form>
<form action="/scripts/update_birdnet.php" onclick="return confirm('BE SURE TO STASH ANY LOCAL CHANGES YOU HAVE MADE TO THE SYSTEM BEFORE UPDATING!!!')">
<button style="color:blue;" type="submit" class="block">Update</button>
</form>
<form action="/scripts/shutdown_system.php" onclick="return confirm('Are you sure you want to shutdown?')">
<button style="color: red;" type="submit" class="block">Shutdown</button>
</form>
<form action="/scripts/clear_all_data.php" onclick="return confirm('Clear ALL Data? This cannot be undone.')">
<button style="color: red;" type="submit" class="block">Clear ALL data</button>
</form>
</div>
</body>
scripts/uninstall.sh
+1 -3
View File
@@ -26,9 +26,7 @@ remove_services() {
}
remove_crons() {
TMPFILE=$(mktemp)
crontab -l | sed -e '/birdnet/,+1d' > "${TMPFILE}"
crontab "${TMPFILE}"
sudo sed -i '/birdnet/,+1d' /etc/crontab
}
remove_icecast() {
scripts/update_birdnet.sh
+3 -2
View File
@@ -28,8 +28,7 @@ remove_services() {
}
remove_crons() {
crontab -u${USER} -l | sed -e '/birdnet/,+1d' > "${tmpfile}"
crontab -u${USER} "${tmpfile}"
sudo sed -i '/birdnet/,+1d' /etc/crontab
}
remove_icecast() {
@@ -51,6 +50,8 @@ remove_scripts() {
remove_services
remove_scripts
# Backup labels.txt
sudo -u${USER} cp -f ~/BirdNET-Pi/model/labels.txt{,.bak}
# Stage 2 does a git pull to fetch new things
sudo -u${USER} git -C ${HOME}/BirdNET-Pi checkout -f
sudo -u${USER} git -C ${HOME}/BirdNET-Pi pull -f
scripts/update_birdnet2.sh
+27 -8
View File
@@ -1,5 +1,6 @@
#!/usr/bin/env bash
# Second stage of update
USER=pi
birdnet_conf=/home/pi/BirdNET-Pi/birdnet.conf
my_dir=${HOME}/BirdNET-Pi/scripts
@@ -7,20 +8,38 @@ my_dir=${HOME}/BirdNET-Pi/scripts
sudo ${my_dir}/update_services.sh
# Stage 1.5: adding new birdnet.conf entries
if ! grep FULL_DISK ${birdnet_conf};then
if ! grep FULL_DISK ${birdnet_conf} &> /dev/null;then
cat << EOF >> ${birdnet_conf}
## FULL_DISK can be set to configure how the system reacts to a full disk
## 0 = Remove the oldest day's worth of recordings
## 1 = Keep all data and `stop_core_services.sh`
## purge = Remove the oldest day's worth of recordings
## keep = Keep all data and `stop_core_services.sh`
FULL_DISK=0
FULL_DISK=purge
EOF
fi
sudo -u${USER} sed -i 's/EXTRACTIONLOG_URL/WEBTERMINAL_URL/g' ${birdnetconf}
# Replace Backup labels.txt
sudo -u${USER} cp -f ~/BirdNET-Pi/model/labels.txt.bak ~/BirdNET-Pi/model/labels.txt
# Stage 2 restarts the services
newservices=$(awk '/service/ && /systemctl/ && !/php/ {print $3}' ${my_dir}/install_services.sh | sort)
for i in ${newservices[@]};do
sudo systemctl restart ${i}
sudo systemctl daemon-reload
sudo systemctl stop birdnet_recording.service
sudo rm -rf ${RECS_DIR}/$(date +%B-%Y/%d-%A)/*
services=(web_terminal.service
spectrogram_viewer.service
pushed_notifications.service
livestream.service
icecast2.service
extraction.timer
extraction.service
chart_viewer.service
birdnet_recording.service
birdnet_log.service)
for i in "${services[@]}";do
sudo systemctl restart "${i}"
done
sudo systemctl restart extraction.timer
scripts/update_db_pwd.sh
+2 -2
View File
@@ -5,7 +5,7 @@ source /etc/birdnet/birdnet.conf
sudo mysql -e "
SET PASSWORD FOR 'birder'@'localhost' = PASSWORD('${DB_PWD}');
FLUSH PRIVILEGES";
git -C /home/pi/BirdNET-Pi checkout -f analyze.py
git -C /home/pi/BirdNET-Pi checkout -f scripts/analyze.py
git -C /home/pi/BirdNET-Pi checkout -f scripts/viewdb.php
sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/analyze.py
sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/scripts/analyze.py
sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/scripts/viewdb.php
scripts/update_db_pwd_bullseye.sh
+2 -2
View File
@@ -5,9 +5,9 @@ source /etc/birdnet/birdnet.conf
mysql -e "
SET PASSWORD FOR 'birder'@'localhost' = PASSWORD('${DB_PWD}');
FLUSH PRIVILEGES";
sudo -u ${USER} git -C /home/pi/BirdNET-Pi checkout -f analyze.py
sudo -u ${USER} git -C /home/pi/BirdNET-Pi checkout -f scripts/server.py
sudo -u ${USER} git -C /home/pi/BirdNET-Pi checkout -f scripts/viewdb.php
sudo -u ${USER} sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/analyze.py
sudo -u ${USER} sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/scripts/server.py
sed -i "s/mysqli.default_host =.*/mysqli.default_host = localhost/g" /etc/php/7.4/fpm/php.ini
sed -i "s/mysqli.default_user =.*/mysqli.default_user = birder/g" /etc/php/7.4/fpm/php.ini
sed -i "s/mysqli.default_pw =.*/mysqli.default_pw = ${DB_PWD}/g" /etc/php/7.4/fpm/php.ini
scripts/update_db_pwd_buster.sh
-16
View File
@@ -1,16 +0,0 @@
#!/usr/bin/env bash
# Update database password
source /etc/birdnet/birdnet.conf
sudo mysql -e "
UPDATE mysql.user
SET Password=PASSWORD('${DB_PWD}')
WHERE USER='birder'
AND Host='localhost';
FLUSH PRIVILEGES";
git -C /home/pi/BirdNET-Pi checkout -f analyze.py
git -C /home/pi/BirdNET-Pi checkout -f scripts/viewdb.php
sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/analyze.py
sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/scripts/viewdb.php
sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/scripts/overview.php
sed -i "s/databasepassword/${DB_PWD}/g" /home/pi/BirdNET-Pi/scripts/viewday.php
scripts/update_inprogress.php
+1 -1
View File
@@ -1,6 +1,6 @@
<?php
$timer=60;
header( "refresh:$timer;url=/viewdb.php" );
header( "refresh:$timer;url=/overview.php" );
?>
<html lang="en">
<meta charset="UTF-8">
scripts/update_services.sh
+81 -56
View File
@@ -1,6 +1,6 @@
#!/usr/bin/env bash
# This reinstalls the services
#set -x # Uncomment to enable debugging
set -x # Uncomment to enable debugging
trap 'rm -f ${tmpfile}' EXIT
trap 'exit 1' SIGINT SIGHUP
USER=pi
@@ -11,18 +11,12 @@ nomachine_url="https://download.nomachine.com/download/7.7/Arm/nomachine_7.7.4_1
gotty_url="https://github.com/yudai/gotty/releases/download/v1.0.1/gotty_linux_arm.tar.gz"
config_file="$(dirname ${my_dir})/birdnet.conf"
set_hostname() {
if [ "$(hostname)" != "birdnetpi" ];then
echo "Setting hostname to 'birdnetpi'"
hostnamectl set-hostname birdnetpi
sed -i 's/raspberrypi/birdnetpi/g' /etc/hosts
install_ftpd() {
if ! [ -f /etc/ftpuseres ];then
apt -y install ftpd
fi
}
update_system() {
apt update && apt -y upgrade
}
install_scripts() {
echo "Installing BirdNET-Pi scripts to /usr/local/bin"
ln -sf ${my_dir}/* /usr/local/bin/
@@ -49,9 +43,10 @@ install_birdnet_analysis() {
cat << EOF > /etc/systemd/system/birdnet_analysis.service
[Unit]
Description=BirdNET Analysis
After=birdnet_server.service
Requires=birdnet_server.service
[Service]
Restart=always
RuntimeMaxSec=10800
Type=simple
RestartSec=2
User=${USER}
@@ -62,6 +57,25 @@ EOF
systemctl enable birdnet_analysis.service
}
install_birdnet_server() {
echo "Installing the birdnet_server.service"
cat << EOF > /etc/systemd/system/birdnet_server.service
[Unit]
Description=BirdNET Analysis Server
Before=birdnet_analysis.service
[Service]
Restart=always
Type=simple
RestartSec=2
User=${USER}
ExecStart=/usr/local/bin/server.py
[Install]
WantedBy=multi-user.target
EOF
systemctl enable birdnet_server.service
}
install_extraction_service() {
echo "Installing the extraction.service and extraction.timer"
cat << EOF > /etc/systemd/system/extraction.service
@@ -121,29 +135,36 @@ create_necessary_dirs() {
sudo -u ${USER} ln -fs $(dirname ${my_dir})/homepage/* ${EXTRACTED}
if [ ! -z ${BIRDNETLOG_URL} ];then
BIRDNETLOG_URL="$(echo ${BIRDNETLOG_URL} | sed 's/\/\//\\\/\\\//g')"
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/"${BIRDNETLOG_URL}"/g" $(dirname ${my_dir})/homepage/*.html
phpfiles="$(grep -l "birdnetpi.local:8080" ${my_dir}/*.php)"
for i in "${phpfiles[@]}";do
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/"${BIRDNETLOG_URL}"/g" ${i}
done
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/${BIRDNETLOG_URL}/g" $(dirname ${my_dir})/homepage/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/${BIRDNETLOG_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/${BIRDNETLOG_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/${BIRDNETLOG_URL}/g" $(dirname ${my_dir})/scripts/*.php
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8080/${BIRDNETLOG_URL}/g" $(dirname ${my_dir})/scripts/*/*.php
fi
if [ ! -z ${EXTRACTIONLOG_URL} ];then
EXTRACTIONLOG_URL="$(echo ${EXTRACTIONLOG_URL} | sed 's/\/\//\\\/\\\//g')"
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/"${EXTRACTIONLOG_URL}"/g" $(dirname ${my_dir})/homepage/*.html
phpfiles="$(grep -l "birdnetpi.local:8888" ${my_dir}/*.php)"
for i in "${phpfiles[@]}";do
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/"${EXTRACTIONLOG_URL}"/g" ${i}
done
if [ ! -z ${WEBTERMINAL_URL} ];then
WEBTERMINAL_URL="$(echo ${WEBTERMINAL_URL} | sed 's/\/\//\\\/\\\//g')"
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/${WEBTERMINAL_URL}/g" $(dirname ${my_dir})/homepage/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/${WEBTERMINAL_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/${WEBTERMINAL_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/${WEBTERMINAL_URL}/g" $(dirname ${my_dir})/scripts/*.php
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local:8888/${WEBTERMINAL_URL}/g" $(dirname ${my_dir})/scripts/*/*.php
fi
sudo -u ${USER} ln -fs $(dirname ${my_dir})/model/labels.txt ${my_dir}/
sudo -u ${USER} ln -fs $(dirname ${my_dir})/scripts ${EXTRACTED}
if [ ! -z ${BIRDNETPI_URL} ];then
if [ -z ${BIRDNETPI_URL} ];then
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/homepage/*.html
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/scripts/*.php
sudo -u${USER} sed -i "s/birdnetpi.local/$(hostname).local/g" $(dirname ${my_dir})/scripts/*/*.php
else
BIRDNETPI_URL="$(echo ${BIRDNETPI_URL} | sed 's/\/\//\\\/\\\//g')"
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/"${BIRDNETPI_URL}"/g" $(dirname ${my_dir})/homepage/*.html
phpfiles="$(grep -l birdnetpi.local ${my_dir}/*.php)"
for i in "${phpfiles[@]}";do
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/"${BIRDNETPI_URL}"/g" ${i}
done
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/homepage/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/scripts/*.html
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/scripts/*.php
sudo -u${USER} sed -i "s/http:\/\/birdnetpi.local/${BIRDNETPI_URL}/g" $(dirname ${my_dir})/scripts/*/*.php
fi
sudo -u ${USER} ln -fs $(dirname ${my_dir})/scripts/spectrogram.php ${EXTRACTED}
@@ -158,6 +179,8 @@ create_necessary_dirs() {
echo "Setting Wttr.in URL to "${LATITUDE}", "${LONGITUDE}""
sudo -u${USER} sed -i "s/https:\/\/v2.wttr.in\//https:\/\/v2.wttr.in\/"${LATITUDE},${LONGITUDE}"/g" $(dirname ${my_dir})/homepage/menu.html
chmod -R g+rw $(dirname ${my_dir})
chmod -R g+rw ${RECS_DIR}
}
generate_BirdDB() {
@@ -168,6 +191,8 @@ generate_BirdDB() {
elif ! grep Date $(dirname ${my_dir})/BirdDB.txt;then
sudo -u ${USER} sed -i '1 i\Date;Time;Sci_Name;Com_Name;Confidence;Lat;Lon;Cutoff;Week;Sens;Overlap' $(dirname ${my_dir})/BirdDB.txt
fi
ln -sf $(dirname ${my_dir})/BirdDB.txt ${my_dir}/BirdDB.txt &&
chown pi:pi ${my_dir}/BirdDB.txt && chmod g+rw ${my_dir}/BirdDB.txt
}
install_alsa() {
@@ -245,7 +270,7 @@ install_Caddyfile() {
if ! [ -z ${CADDY_PWD} ];then
HASHWORD=$(caddy hash-password -plaintext ${CADDY_PWD})
cat << EOF > /etc/caddy/Caddyfile
http://localhost http://birdnetpi.local ${BIRDNETPI_URL} {
http://localhost http://$(hostname).local ${BIRDNETPI_URL} {
root * ${EXTRACTED}
file_server browse
basicauth /Processed* {
@@ -266,7 +291,7 @@ http://localhost http://birdnetpi.local ${BIRDNETPI_URL} {
EOF
else
cat << EOF > /etc/caddy/Caddyfile
http://localhost http://birdnetpi.local ${BIRDNETPI_URL} {
http://localhost http://$(hostname).local ${BIRDNETPI_URL} {
root * ${EXTRACTED}
file_server browse
reverse_proxy /stream localhost:8000
@@ -275,10 +300,18 @@ http://localhost http://birdnetpi.local ${BIRDNETPI_URL} {
EOF
fi
if [ ! -z ${EXTRACTIONLOG_URL} ];then
if [ ! -z ${WEBTERMINAL_URL} ] && [ ! -z ${HASHWORD} ];then
cat << EOF >> /etc/caddy/Caddyfile
${EXTRACTIONLOG_URL} {
${WEBTERMINAL_URL} {
basicauth {
birdnet ${HASHWORD}
}
reverse_proxy localhost:8888
}
EOF
elif [ ! -z ${WEBTERMINAL_URL} ] && [ -z ${HASHWORD} ];then
cat << EOF >> /etc/caddy/Caddyfile
${WEBTERMINAL_URL} {
reverse_proxy localhost:8888
}
EOF
@@ -295,10 +328,7 @@ EOF
}
update_etc_hosts() {
#BIRDNETPI_URL="$(echo ${BIRDNETPI_URL} | sed 's/\/\//\\\/\\\//g')"
#EXTRACTIONLOG_URL="$(echo ${EXTRACTIONLOG_URL} | sed 's/\/\//\\\/\\\//g')"
#BIRDNETLOG_URL="$(echo ${BIRDNETLOG_URL} | sed 's/\/\//\\\/\\\//g')"
sed -ie s/'birdnetpi.local'/"birdnetpi.local ${BIRDNETPI_URL//https:\/\/} ${EXTRACTIONLOG_URL//https:\/\/} ${BIRDNETLOG_URL//https:\/\/}"/g /etc/hosts
sed -ie s/'$(hostname).local'/"$(hostname).local ${BIRDNETPI_URL//https:\/\/} ${WEBTERMINAL_URL//https:\/\/} ${BIRDNETLOG_URL//https:\/\/}"/g /etc/hosts
}
install_avahi_aliases() {
@@ -323,7 +353,7 @@ ExecStart=/bin/bash -c "/usr/bin/avahi-publish -a -R %I $(hostname -I |cut -d' '
[Install]
WantedBy=multi-user.target
EOF
systemctl enable avahi-alias@birdnetpi.local.service
systemctl enable avahi-alias@"$(hostname)".local.service
}
install_spectrogram_service() {
@@ -368,6 +398,8 @@ install_gotty_logs() {
fi
sudo -u ${USER} ln -sf $(dirname ${my_dir})/templates/gotty \
${HOME}/.gotty
sudo -u ${USER} ln -sf $(dirname ${my_dir})/templates/bashrc \
${HOME}/.bashrc
echo "Installing the birdnet_log.service"
cat << EOF > /etc/systemd/system/birdnet_log.service
[Unit]
@@ -379,16 +411,16 @@ RestartSec=3
Type=simple
User=${USER}
Environment=TERM=xterm-256color
ExecStart=/usr/local/bin/gotty -p 8080 --title-format "BirdNET-Pi Log" journalctl -o cat -fu birdnet_analysis.service
ExecStart=/usr/local/bin/gotty -p 8080 --title-format "BirdNET-Pi Log" journalctl -o cat -fu birdnet_server.service
[Install]
WantedBy=multi-user.target
EOF
systemctl enable birdnet_log.service
echo "Installing the extraction_log.service"
cat << EOF > /etc/systemd/system/extraction_log.service
echo "Installing the Web Terminal"
cat << EOF > /etc/systemd/system/web_terminal.service
[Unit]
Description=BirdNET Extraction Log
Description=BirdNET-Pi Web Terminal
[Service]
Restart=on-failure
@@ -396,12 +428,12 @@ RestartSec=3
Type=simple
User=${USER}
Environment=TERM=xterm-256color
ExecStart=/usr/local/bin/gotty -p 8888 --title-format "Extractions Log" journalctl -o cat -fu extraction.service
ExecStart=/usr/local/bin/gotty -w -p 8888 --title-format "BirdNET-Pi Terminal" bash
[Install]
WantedBy=multi-user.target
EOF
systemctl enable extraction_log.service
systemctl enable web_terminal.service
}
install_sox() {
@@ -419,7 +451,7 @@ install_php() {
if ! which php &> /dev/null || ! which php-fpm || ! apt list --installed | grep php-xml;then
echo "Installing PHP modules"
apt -qq update
apt install -qqy php php-fpm php-mysql php-xml
apt install -qqy php php-fpm php-mysql php-xml php-zip
else
echo "PHP and PHP-FPM installed"
fi
@@ -500,20 +532,13 @@ install_nomachine() {
install_cleanup_cron() {
echo "Installing the cleanup.cron"
if ! crontab -u ${USER} -l &> /dev/null;then
crontab -u ${USER} $(dirname ${my_dir})/templates/cleanup.cron &> /dev/null
else
crontab -u ${USER} -l > ${tmpfile}
cat $(dirname ${my_dir})/templates/cleanup.cron >> ${tmpfile}
crontab -u ${USER} "${tmpfile}" &> /dev/null
fi
cat $(dirname ${my_dir})/templates/cleanup.cron >> /etc/crontab
}
install_selected_services() {
set_hostname
update_system
install_scripts
install_birdnet_analysis
install_birdnet_server
if [[ "${DO_EXTRACTIONS}" =~ [Yy] ]];then
install_extraction_service
@@ -548,7 +573,7 @@ install_selected_services() {
create_necessary_dirs
generate_BirdDB
install_cleanup_cron
systemctl restart php${php_version}-fpm
install_ftpd
}
if [ -f ${config_file} ];then
scripts/viewdb.php
+25 -33
View File
@@ -1,4 +1,8 @@
<?php
ini_set('display_errors', 1);
ini_set('display_startup_errors', 1);
error_reporting(E_ALL);
header("refresh: 30;");
$mysqli = mysqli_connect();
$mysqli->select_db('birds');
@@ -10,36 +14,36 @@ if ($mysqli->connect_error) {
}
// SQL query to select data from database
$sql = "SELECT * FROM detections
$sql = "SELECT COUNT(*) AS 'Total' FROM detections
ORDER BY Date DESC, Time DESC";
$fulltable = $mysqli->query($sql);
$totalcount=mysqli_num_rows($fulltable);
$totalcount = $mysqli->query($sql);
$sql1 = "SELECT * FROM detections
WHERE Date = CURDATE()
ORDER BY Date DESC, Time DESC";
$sql1 = "SELECT Date, Time, Sci_Name, Com_Name, MAX(Confidence)
FROM detections
WHERE Date = CURDATE()
GROUP BY Date, Time, Sci_Name, Com_Name
ORDER BY Time DESC";
$mosttable = $mysqli->query($sql1);
$sql2 = "SELECT * FROM detections
$sql2 = "SELECT COUNT(*) AS 'Total' FROM detections
WHERE Date = CURDATE()";
$todaystable = $mysqli->query($sql2);
$todayscount=mysqli_num_rows($todaystable);
$todayscount = $mysqli->query($sql2);
$sql3 = "SELECT * FROM detections
$sql3 = "SELECT COUNT(*) AS 'Total' FROM detections
WHERE Date = CURDATE()
AND Time >= DATE_SUB(NOW(),INTERVAL 1 HOUR)";
$lasthourtable = $mysqli->query($sql3);
$lasthourcount=mysqli_num_rows($lasthourtable);
$lasthourcount = $mysqli->query($sql3);
$sql4 = "SELECT Com_Name, Date, Time, MAX(Confidence)
FROM detections
GROUP BY Com_Name
$sql4 = "SELECT Com_Name, Date, Time, MAX(Confidence)
FROM detections
WHERE Date = CURDATE()
GROUP BY Com_Name
ORDER BY MAX(Confidence) DESC";
$specieslist = $mysqli->query($sql4);
$speciescount=mysqli_num_rows($specieslist);
$speciescount = mysqli_num_rows($specieslist);
$sql5 = "SELECT Com_Name,COUNT(*)
AS Total
AS 'Total'
FROM detections
GROUP BY Com_Name
ORDER BY Total DESC";
@@ -71,9 +75,9 @@ $mysqli->close();
<th>Number of Unique Species</th>
</tr>
<tr>
<td><?php echo $totalcount;?></td>
<td><?php echo $todayscount;?></td>
<td><?php echo $lasthourcount;?></td>
<td><?php while ($row = $totalcount->fetch_assoc()) { echo $row['Total']; };?></td>
<td><?php while ($row = $todayscount->fetch_assoc()) { echo $row['Total']; };?></td>
<td><?php while ($row = $lasthourcount->fetch_assoc()) { echo $row['Total']; };?></td>
<td><?php echo $speciescount;?></td>
</tr>
</table>
@@ -87,18 +91,12 @@ $mysqli->close();
<th>Scientific Name</th>
<th>Common Name</th>
<th>Confidence</th>
<th>Lat</th>
<th>Lon</th>
<th>Cutoff</th>
<th>Week</th>
<th>Sens</th>
<th>Overlap</th>
</tr>
<!-- PHP CODE TO FETCH DATA FROM ROWS-->
<?php // LOOP TILL END OF DATA
while($rows=$mosttable ->fetch_assoc())
{
$Confidence = sprintf("%.1f%%", $rows['Confidence'] * 100);
$Confidence = sprintf("%.1f%%", $rows['MAX(Confidence)'] * 100);
?>
<tr>
<!--FETCHING DATA FROM EACH
@@ -107,12 +105,6 @@ while($rows=$mosttable ->fetch_assoc())
<td><?php echo $rows['Sci_Name'];?></td>
<td><?php echo $rows['Com_Name'];?></td>
<td><?php echo $Confidence;?></td>
<td><?php echo $rows['Lat'];?></td>
<td><?php echo $rows['Lon'];?></td>
<td><?php echo $rows['Cutoff'];?></td>
<td><?php echo $rows['Week'];?></td>
<td><?php echo $rows['Sens'];?></td>
<td><?php echo $rows['Overlap'];?></td>
</tr>
<?php
}
scripts/write_advanced.php
+3 -3
View File
@@ -3,7 +3,7 @@ $caddy_pwd = $_POST["caddy_pwd"];
$db_pwd = $_POST["db_pwd"];
$ice_pwd = $_POST["ice_pwd"];
$birdnetpi_url = $_POST["birdnetpi_url"];
$extractionlog_url = $_POST["extractionlog_url"];
$webterminal_url = $_POST["webterminal_url"];
$birdnetlog_url = $_POST["birdnetlog_url"];
$overlap = $_POST["overlap"];
$confidence = $_POST["confidence"];
@@ -19,7 +19,7 @@ $contents = preg_replace("/CADDY_PWD=.*/", "CADDY_PWD=$caddy_pwd", $contents);
$contents = preg_replace("/DB_PWD=.*/", "DB_PWD=$db_pwd", $contents);
$contents = preg_replace("/ICE_PWD=.*/", "ICE_PWD=$ice_pwd", $contents);
$contents = preg_replace("/BIRDNETPI_URL=.*/", "BIRDNETPI_URL=$birdnetpi_url", $contents);
$contents = preg_replace("/EXTRACTIONLOG_URL=.*/", "EXTRACTIONLOG_URL=$extractionlog_url", $contents);
$contents = preg_replace("/WEBTERMINAL_URL=.*/", "WEBTERMINAL_URL=$webterminal_url", $contents);
$contents = preg_replace("/BIRDNETLOG_URL=.*/", "BIRDNETLOG_URL=$birdnetlog_url", $contents);
$contents = preg_replace("/OVERLAP=.*/", "OVERLAP=$overlap", $contents);
$contents = preg_replace("/CONFIDENCE=.*/", "CONFIDENCE=$confidence", $contents);
@@ -35,7 +35,7 @@ $contents2 = preg_replace("/CADDY_PWD=.*/", "CADDY_PWD=$caddy_pwd", $contents2);
$contents2 = preg_replace("/DB_PWD=.*/", "DB_PWD=$db_pwd", $contents2);
$contents2 = preg_replace("/ICE_PWD=.*/", "ICE_PWD=$ice_pwd", $contents2);
$contents2 = preg_replace("/BIRDNETPI_URL=.*/", "BIRDNETPI_URL=$birdnetpi_url", $contents2);
$contents2 = preg_replace("/EXTRACTIONLOG_URL=.*/", "EXTRACTIONLOG_URL=$extractionlog_url", $contents2);
$contents2 = preg_replace("/WEBTERMINAL_URL=.*/", "WEBTERMINAL_URL=$webterminal_url", $contents2);
$contents2 = preg_replace("/BIRDNETLOG_URL=.*/", "BIRDNETLOG_URL=$birdnetlog_url", $contents2);
$contents2 = preg_replace("/OVERLAP=.*/", "OVERLAP=$overlap", $contents2);
$contents2 = preg_replace("/CONFIDENCE=.*/", "CONFIDENCE=$confidence", $contents2);
scripts/write_config.php
+17 -13
View File
@@ -1,4 +1,7 @@
<?php
error_reporting(E_ALL);
ini_set('display_errors',1);
$latitude = $_POST["latitude"];
$longitude = $_POST["longitude"];
$birdweather_id = $_POST["birdweather_id"];
@@ -23,24 +26,25 @@ $fh = fopen("/home/pi/BirdNET-Pi/birdnet.conf", "w");
$fh2 = fopen("/home/pi/BirdNET-Pi/thisrun.txt", "w");
fwrite($fh, $contents);
fwrite($fh2, $contents2);
@session_start();
if(true){
$_SESSION['success'] = 1;
header("Location:config.php");
session_start();
$_SESSION['success'] = 1;
if(isset($_POST["normal"])){
header('Location:config.php');
}else{
header('Location:../../');
}
$language = $_POST["language"];
if ($language != "none"){
$command = "sudo -upi set -x; sudo -upi mv /home/pi/BirdNET-Pi/model/labels.txt /home/pi/BirdNET-Pi/model/labels.txt.old && sudo -upi unzip /home/pi/BirdNET-Pi/model/labels_l18n.zip $language -d /home/pi/BirdNET-Pi/model && sudo -upi mv /home/pi/BirdNET-Pi/model/$language /home/pi/BirdNET-Pi/model/labels.txt";
$command = "sudo -upi mv /home/pi/BirdNET-Pi/model/labels.txt /home/pi/BirdNET-Pi/model/labels.txt.old && sudo -upi unzip /home/pi/BirdNET-Pi/model/labels_l18n.zip $language -d /home/pi/BirdNET-Pi/model && sudo -upi mv /home/pi/BirdNET-Pi/model/$language /home/pi/BirdNET-Pi/model/labels.txt";
$command_output = `$command`;
echo $command_output;
@session_start();
if(true){
$_SESSION['success'] = 1;
header("Location:config.php");
}
session_start();
$_SESSION['success'] = 1;
if(isset($_POST["normal"])){
header('Location:config.php');
}else{
header('Location:../../');
}
}
?>
scripts/write_config.sh
+1 -1
View File
@@ -9,5 +9,5 @@ sed -i s/'^ICE_PWD=$'/"ICE_PWD=${ice_pwd}"/g ${birders_conf}
sed -i s/'^DB_PWD=$'/"DB_PWD=${db_pwd}"/g ${birders_conf}
sed -i s/'^BIRDWEATHER_ID=$'/"BIRDWEATHER_ID=${birdweather_id}"/g ${birders_conf}
sed -i s/'^BIRDNETPI_URL=$'/"BIRDNETPI_URL=${birdnetpi_url/\/\//\\\/\\\/}"/g ${birders_conf}
sed -i s/'^EXTRACTIONLOG_URL=$'/"EXTRACTIONLOG_URL=${extractionlog_url/\/\//\\\/\\\/}"/g ${birders_conf}
sed -i s/'^WEBTERMINAL_URL=$'/"WEBTERMINAL_URL=${extractionlog_url/\/\//\\\/\\\/}"/g ${birders_conf}
sed -i s/'^BIRDNETLOG_URL=$'/"BIRDNETLOG_URL=${birdnetlog_url/\/\//\\\/\\\/}"/g ${birders_conf}
templates/bashrc
+114
View File
@@ -0,0 +1,114 @@
# ~/.bashrc: executed by bash(1) for non-login shells.
# see /usr/share/doc/bash/examples/startup-files (in the package bash-doc)
# for examples
# If not running interactively, don't do anything
case $- in
*i*) ;;
*) return;;
esac
# don't put duplicate lines or lines starting with space in the history.
# See bash(1) for more options
HISTCONTROL=ignoreboth
# append to the history file, don't overwrite it
shopt -s histappend
# for setting history length see HISTSIZE and HISTFILESIZE in bash(1)
HISTSIZE=1000
HISTFILESIZE=2000
# check the window size after each command and, if necessary,
# update the values of LINES and COLUMNS.
shopt -s checkwinsize
# If set, the pattern "**" used in a pathname expansion context will
# match all files and zero or more directories and subdirectories.
#shopt -s globstar
# make less more friendly for non-text input files, see lesspipe(1)
#[ -x /usr/bin/lesspipe ] && eval "$(SHELL=/bin/sh lesspipe)"
# set variable identifying the chroot you work in (used in the prompt below)
if [ -z "${debian_chroot:-}" ] && [ -r /etc/debian_chroot ]; then
debian_chroot=$(cat /etc/debian_chroot)
fi
# set a fancy prompt (non-color, unless we know we "want" color)
case "$TERM" in
xterm-color|*-256color) color_prompt=yes;;
esac
# uncomment for a colored prompt, if the terminal has the capability; turned
# off by default to not distract the user: the focus in a terminal window
# should be on the output of commands, not on the prompt
#force_color_prompt=yes
if [ -n "$force_color_prompt" ]; then
if [ -x /usr/bin/tput ] && tput setaf 1 >&/dev/null; then
# We have color support; assume it's compliant with Ecma-48
# (ISO/IEC-6429). (Lack of such support is extremely rare, and such
# a case would tend to support setf rather than setaf.)
color_prompt=yes
else
color_prompt=
fi
fi
if [ "$color_prompt" = yes ]; then
PS1='${debian_chroot:+($debian_chroot)}\[\033[01;37m\]\h\[\033[00m\]:\[\033[01;33m\]\w\[\033[00m\]\$ '
else
PS1='${debian_chroot:+($debian_chroot)}\u@\h:\w\$ '
fi
unset color_prompt force_color_prompt
# If this is an xterm set the title to user@host:dir
case "$TERM" in
xterm*|rxvt*)
PS1="\[\e]0;${debian_chroot:+($debian_chroot)}\u@\h: \w\a\]$PS1"
;;
*)
;;
esac
# enable color support of ls and also add handy aliases
if [ -x /usr/bin/dircolors ]; then
test -r ~/.dircolors && eval "$(dircolors -b ~/.dircolors)" || eval "$(dircolors -b)"
alias ls='ls --color=auto'
#alias dir='dir --color=auto'
#alias vdir='vdir --color=auto'
#alias grep='grep --color=auto'
#alias fgrep='fgrep --color=auto'
#alias egrep='egrep --color=auto'
fi
# colored GCC warnings and errors
#export GCC_COLORS='error=01;31:warning=01;35:note=01;36:caret=01;32:locus=01:quote=01'
# some more ls aliases
#alias ll='ls -l'
#alias la='ls -A'
#alias l='ls -CF'
# Alias definitions.
# You may want to put all your additions into a separate file like
# ~/.bash_aliases, instead of adding them here directly.
# See /usr/share/doc/bash-doc/examples in the bash-doc package.
if [ -f ~/.bash_aliases ]; then
. ~/.bash_aliases
fi
# enable programmable completion features (you don't need to enable
# this, if it's already enabled in /etc/bash.bashrc and /etc/profile
# sources /etc/bash.bashrc).
if ! shopt -oq posix; then
if [ -f /usr/share/bash-completion/bash_completion ]; then
. /usr/share/bash-completion/bash_completion
elif [ -f /etc/bash_completion ]; then
. /etc/bash_completion
fi
fi
cd ~/BirdNET-Pi
templates/cleanup.cron
+3 -3
View File
@@ -1,6 +1,6 @@
#birdnet
*/5 * * * * /usr/local/bin/disk_check.sh &> /dev/null
*/5 * * * * pi /usr/local/bin/disk_check.sh &> /dev/null
#birdnet
*/3 * * * * /usr/local/bin/cleanup.sh &> /dev/null
*/3 * * * * pi /usr/local/bin/cleanup.sh &> /dev/null
#birdnet
@reboot /usr/local/bin/cleanup.sh &> /dev/null
@reboot pi /usr/local/bin/cleanup.sh &> /dev/null
templates/gotty
+1 -1
View File
@@ -1,5 +1,5 @@
preferences {
font_size = 16
font_size = 18
foreground_color = "rgb(0, 0, 0)"
background_color = "rgb(119, 196, 135)"
}
templates/phpsysinfo.ini
+2 -2
View File
@@ -928,12 +928,12 @@ ACCESS="command"
; - "systeminfo" systeminfo command is run everytime the block gets refreshed or build (WinNT)
;
COMMAND="curl"
COMMAND="network_info.sh"
#COMMAND="cat"
; define COMMAND parameters (for command access)
;
PARAMS="-s4 ifconfig.co"
PARAMS=""
#PARAMS="/home/pi/BirdNET-Pi/thisrun.txt"
[pingtest]
tflite_runtime-2.6.0-cp37-none-linux_aarch64.whl
BIN
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Binary file not shown.
version.md
+15
View File
@@ -1,3 +1,18 @@
# main v.11.1
- `server.py` socket
- Removed DB password from scripts
- FTP included
- WebGUI tools:
- Settings > Advanced Settings
- Include/Exclude Species List Editor
- Web Terminal
- Removed Extraction Logging
- Lowered minimum recording length
- No longer requires CADDY_PWD
- Auto-set random DB_PWD
- New (but still changing) charts
- Crontabs now in `/etc/crontab` instead of `pi` user
# main v.11
- New "Reconfigure System" GUI
- labels.txt language support for 20+ languages