#!/home/pi/BirdNET-Pi/birdnet/bin/python3 import streamlit as st import pandas as pd import numpy as np import plotly.graph_objects as go from plotly.subplots import make_subplots from datetime import timedelta, datetime import sqlite3 from sqlite3 import Connection from pathlib import Path URI_SQLITE_DB = "/home/pi/BirdNET-Pi/scripts/birds.db" @st.cache(hash_funcs={Connection: id}) def get_connection(path: str): """Put the connection in cache to reuse if path does not change between Streamlit reruns. NB : https://stackoverflow.com/questions/48218065/programmingerror-sqlite-objects-created-in-a-thread-can-only-be-used-in-that-sa """ return sqlite3.connect(path, check_same_thread=False) def get_data(conn: Connection): df1 = pd.read_sql("SELECT * FROM detections", con=conn) return df1 conn = get_connection(URI_SQLITE_DB) #@st.cache() #def load_data(): # df1 = pd.read_csv('/home/pi/BirdNET-Pi/BirdDB.txt', sep=';') # return df1 # Read in the cereal data #df = load_data() df = get_data(conn) df2=df.copy() df2['DateTime']=pd.to_datetime(df2['Date'] + " " + df2['Time']) df2=df2.set_index('DateTime') # Filter on date range # Date as calendars #Start_Date1 = pd.to_datetime(st.sidebar.date_input('Which date do you want to start?', value = df2.index.min())) #End_Date1 = pd.to_datetime(st.sidebar.date_input('Which date do you want to end?', value = df2.index.max())) # Date as slider Start_Date = pd.to_datetime(df2.index.min()) End_Date = pd.to_datetime(df2.index.max()) Date_Slider = st.sidebar.slider('Date Range', value=(Start_Date.to_pydatetime(), End_Date.to_pydatetime()) ) filt = (df2.index >= Date_Slider[0]) & (df2.index <= Date_Slider[1]+timedelta(days=1)) df2 = df2[filt] #Create species count for selected date range Specie_Count=df2['Com_Name'].value_counts() #Create species treemap # Create Hourly Crosstab hourly=pd.crosstab(df2['Com_Name'],df2.index.hour, dropna=False) # Filter on species species = list(hourly.index) top_N = st.sidebar.select_slider( 'Select Number of Birds to Show', list(range(1,len(Specie_Count))), value=min(10,len(Specie_Count)-1)) top_N_species = (df2['Com_Name'].value_counts()[:top_N]) specie = st.sidebar.selectbox('Which bird would you like to explore?', species, index=species.index(list(top_N_species.index)[0])) font_size=15 #specie filter filt=df2['Com_Name']==specie df_counts=df2[filt].resample('D').count() fig = make_subplots( rows=2, cols =2, specs= [[{"type":"xy","rowspan":2}, {"type":"polar"}], [None, {"type":"xy"}]], subplot_titles=('Species in Date Range', ''+specie+'
' 'Total Detections:'+str('{:,}'.format(sum(df_counts.Time)))+'
' 'Max Confidence:'+str('{:.2f}%'.format(max(df2[df2['Com_Name']==specie]['Confidence'])*100))+'
' 'Median Confidence:'+str('{:.2f}%'.format(np.median(df2[df2['Com_Name']==specie]['Confidence'])*100))+'
' ) ) # fig.layout.height=900 # fig.layout.width=1500 #Plot seen species for selected date range and number of species fig.add_trace(go.Bar(y=top_N_species.index, x=top_N_species, orientation='h'), row=1,col=1) fig.update_layout( margin=dict(l=0, r=50, t=50, b=0), yaxis={'categoryorder':'total ascending'}) # Set 360 degrees, 24 hours for polar plot theta = np.linspace(0.0, 360, 24, endpoint=False) d=pd.DataFrame(np.zeros((23,1))).squeeze() radius = hourly.loc[specie] radius=(d+radius).fillna(0) fig.add_trace(go.Barpolar(r = radius, theta=theta), row=1, col=2) fig.update_layout( autosize=True, width = 1000, height = 750, showlegend=False, polar = dict( radialaxis = dict( tickfont_size = font_size, showticklabels = False), angularaxis = dict( tickfont_size= font_size, rotation = -90, direction = 'clockwise', tickmode='array', tickvals=[0,45,90,135,180,225,270,315], ticktext=['12am','3am', '6am','9am','12pm','3pm', '6pm','9pm'], hoverformat = ""#"%{theta}:
Popularity: %{percent}
%{r}" ), ), ) fig.layout.annotations[1].update(x=0.775,y=0.4, font_size=25) x=df_counts.index y=df_counts['Com_Name'] fig.add_trace(go.Bar(x=df_counts.index,y=df_counts['Time']), row=2, col=2) container=st.container() container.plotly_chart(fig, use_container_width=True)